RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CEP126Q9P2H0 1117 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CCDC9Q9Y3X0 531 aaKnown RBP9.67□□□□□ -0.86
NEDD1-201ENST00000266742 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 TTC12Q9H892 705 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-201ENST00000266742 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 NAA16Q6N069 864 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-201ENST00000266742 FAM173BQ6P4H8 233 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 CLSTN2Q9H4D0 955 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 ABCC6O95255 1503 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 MEGF6O75095 1541 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 ERVV-2B6SEH9 535 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 GOLGA6L19H0YKK7 550 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 EYA2O00167 538 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 PFKFB2O60825 505 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 CCDC73Q6ZRK6 1079 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 LRP10Q7Z4F1 713 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 ZCRB1Q8TBF4 217 aaKnown RBP9.66□□□□□ -0.86
NEDD1-201ENST00000266742 DDX11Q96FC9 970 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
NEDD1-201ENST00000266742 LIG1P18858 919 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 CCDC129Q6ZRS4 1044 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 TOM1L2Q6ZVM7 507 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 MPNDQ8N594 471 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
NEDD1-201ENST00000266742 ZNF830Q96NB3 372 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-201ENST00000266742 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 SIPA1L3O60292 1781 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 TRIM5Q9C035 493 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 RNF113AO15541 343 aaKnown RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 CIAO1O76071 339 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 ZFYP08048 801 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 SEC62Q99442 399 aaKnown RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-201ENST00000266742 DCCP43146 1447 aa9.65□□□□□ -0.86
NEDD1-201ENST00000266742 JAK2O60674 1132 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 DTNBO60941 627 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 CASP7P55210 303 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 ANO6Q4KMQ2 910 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 SPC24Q8NBT2 197 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.87
NEDD1-201ENST00000266742 ZNF609O15014 1411 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TMEM94Q12767 1356 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 ZNF165P49910 485 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 RBM10P98175 930 aaKnown RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 ZMYM1Q5SVZ6 1142 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 MRVI1Q9Y6F6 885 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 NDUFB9Q9Y6M9 179 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TNS3Q68CZ2 1445 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 KINO60870 393 aaKnown RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TIMM10P62072 90 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 FOXO4P98177 505 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 RESTQ13127 1097 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TTC39AQ5SRH9 613 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 TCHHQ07283 1943 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 SCRN1Q12765 414 aa9.64□□□□□ -0.87
NEDD1-201ENST00000266742 IMMTQ16891 758 aaKnown RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 ZNF274Q96GC6 653 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-201ENST00000266742 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 A0A1B0GUL7 405 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 BECN2A8MW95 431 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 SPTLC3Q9NUV7 552 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 CPDO75976 1380 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 FKBP4Q02790 459 aaKnown RBP eCLIP9.63□□□□□ -0.87
NEDD1-201ENST00000266742 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 LUZP1Q86V48 1076 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 TEX13AQ9BXU3 409 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-201ENST00000266742 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
NEDD1-201ENST00000266742 RBM43Q6ZSC3 357 aaKnown RBP9.63□□□□□ -0.87
NEDD1-201ENST00000266742 ATG9AQ7Z3C6 839 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 NAT10Q9H0A0 1025 aaKnown RBP9.63□□□□□ -0.87
NEDD1-201ENST00000266742 CBX8Q9HC52 389 aa9.63□□□□□ -0.87
NEDD1-201ENST00000266742 E7EWF7 191 aa9.62□□□□□ -0.87
NEDD1-201ENST00000266742 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
NEDD1-201ENST00000266742 SF3A1Q15459 793 aaKnown RBP9.62□□□□□ -0.87
NEDD1-201ENST00000266742 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
NEDD1-201ENST00000266742 NSUN7Q8NE18 718 aaKnown RBP9.62□□□□□ -0.87
NEDD1-201ENST00000266742 DDX17Q92841 729 aaKnown RBP9.62□□□□□ -0.87
NEDD1-201ENST00000266742 NR1I2O75469 434 aa9.62□□□□□ -0.87
NEDD1-201ENST00000266742 CEBPZQ03701 1054 aaKnown RBP9.62□□□□□ -0.87
NEDD1-201ENST00000266742 TTLL7Q6ZT98 887 aa9.62□□□□□ -0.87
NEDD1-201ENST00000266742 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms