RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
SNRNP40-201ENST00000263694 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
SNRNP40-201ENST00000263694 BRIP1Q9BX63 1249 aa12.02□□□□□ -0.49
SNRNP40-201ENST00000263694 RIPOR2Q9Y4F9 1068 aa12.02□□□□□ -0.49
SNRNP40-201ENST00000263694 RTL9Q8NET4 1388 aa12.02□□□□□ -0.49
SNRNP40-201ENST00000263694 TSHZ3Q63HK5 1081 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 MPHOSPH8Q99549 860 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 SNAP23O00161 211 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 CIAO1O76071 339 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 IGHMBP2P38935 993 aaKnown RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 CDC5LQ99459 802 aaKnown RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 MTFR1LQ9H019 292 aa12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
SNRNP40-201ENST00000263694 RIC1Q4ADV7 1423 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 TAF5LO75529 589 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 CHRNA5P30532 468 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 TIMM10P62072 90 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
SNRNP40-201ENST00000263694 METTL24Q5JXM2 366 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 AACSQ86V21 672 aa12□□□□□ -0.49
SNRNP40-201ENST00000263694 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
SNRNP40-201ENST00000263694 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
SNRNP40-201ENST00000263694 PDE6BP35913 854 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 LRP5O75197 1615 aa11.99□□□□□ -0.49
SNRNP40-201ENST00000263694 CACNA1SQ13698 1873 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 SRGNP10124 158 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 CHRNDQ07001 517 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 GRAPQ13588 217 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 GRAPLQ8TC17 118 aaPredicted RBP11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 BSDC1Q9NW68 430 aaPredicted RBP11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
SNRNP40-201ENST00000263694 IFIT2P09913 472 aaKnown RBP11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 POLD1P28340 1107 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 HOXA10P31260 410 aaPredicted RBP11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 PTGER2P43116 358 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.497e-10■□□□□ 9.8
SNRNP40-201ENST00000263694 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 MINPP1Q9UNW1 487 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
SNRNP40-201ENST00000263694 H0YIN7 160 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 NPR1P16066 1061 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 ADORA1P30542 326 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 PDE1AP54750 535 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 OLFM4Q6UX06 510 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
SNRNP40-201ENST00000263694 C10orf71Q711Q0 1435 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 MROH5Q6ZUA9 1318 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 A0A0G2JLW4 131 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 A0A1B0GUL7 405 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 PDE8BO95263 885 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 MX1P20591 662 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 KLHL34Q8N239 644 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 MASTLQ96GX5 879 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 WWC3Q9ULE0 1092 aa11.96□□□□□ -0.5
SNRNP40-201ENST00000263694 ZNF609O15014 1411 aa11.95□□□□□ -0.5
SNRNP40-201ENST00000263694 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
SNRNP40-201ENST00000263694 DPEP1P16444 411 aa11.95□□□□□ -0.5
SNRNP40-201ENST00000263694 ATP2B3Q16720 1220 aa11.95□□□□□ -0.5
SNRNP40-201ENST00000263694 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
SNRNP40-201ENST00000263694 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 GSPT1P15170 499 aaKnown RBP11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 STAP2Q9UGK3 403 aa11.94□□□□□ -0.5
SNRNP40-201ENST00000263694 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 BBOX1O75936 387 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 FGFR2P21802 821 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 KCNA3P22001 575 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 KLRK1P26718 216 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 GPSM2P81274 684 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 PI4K2BQ8TCG2 481 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 NDUFB9Q9Y6M9 179 aa11.93□□□□□ -0.5
SNRNP40-201ENST00000263694 ALDH1B1P30837 517 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms