RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 KIF4BQ2VIQ3 1234 aa11.64□□□□□ -0.55
LCN1-201ENST00000263598 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
LCN1-201ENST00000263598 SULF1Q8IWU6 871 aa11.64□□□□□ -0.55
LCN1-201ENST00000263598 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
LCN1-201ENST00000263598 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
LCN1-201ENST00000263598 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
LCN1-201ENST00000263598 FAM155AB1AL88 458 aaPredicted RBP11.63□□□□□ -0.55
LCN1-201ENST00000263598 ADM5C9JUS6 153 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 EGFRP00533 1210 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
LCN1-201ENST00000263598 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 RIC3Q7Z5B4 369 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 ANKIB1Q9P2G1 1089 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
LCN1-201ENST00000263598 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
LCN1-201ENST00000263598 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
LCN1-201ENST00000263598 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
LCN1-201ENST00000263598 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
LCN1-201ENST00000263598 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
LCN1-201ENST00000263598 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
LCN1-201ENST00000263598 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
LCN1-201ENST00000263598 DDX60Q8IY21 1712 aaKnown RBP11.62□□□□□ -0.55
LCN1-201ENST00000263598 MYBBP1AQ9BQG0 1328 aaKnown RBP11.61□□□□□ -0.55
LCN1-201ENST00000263598 TAF1P21675 1872 aa11.61□□□□□ -0.55
LCN1-201ENST00000263598 UFL1O94874 794 aa11.61□□□□□ -0.55
LCN1-201ENST00000263598 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
LCN1-201ENST00000263598 RNF186Q9NXI6 227 aa11.61□□□□□ -0.55
LCN1-201ENST00000263598 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
LCN1-201ENST00000263598 TRPA1O75762 1119 aa11.6□□□□□ -0.55
LCN1-201ENST00000263598 SLC10A3P09131 477 aa11.6□□□□□ -0.55
LCN1-201ENST00000263598 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
LCN1-201ENST00000263598 RSBN1LQ6PCB5 846 aaPredicted RBP11.6□□□□□ -0.55
LCN1-201ENST00000263598 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
LCN1-201ENST00000263598 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
LCN1-201ENST00000263598 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 PDE8AO60658 829 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 ZNF280AP59817 542 aaPredicted RBP11.59□□□□□ -0.55
LCN1-201ENST00000263598 FKBP1BP68106 108 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 SCARF1Q14162 830 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
LCN1-201ENST00000263598 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 CSRNP1Q96S65 589 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 MYD88Q99836 296 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
LCN1-201ENST00000263598 ASTN2O75129 1339 aaPredicted RBP11.59□□□□□ -0.55
LCN1-201ENST00000263598 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
LCN1-201ENST00000263598 USP17L8P0C7I0 530 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
LCN1-201ENST00000263598 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 PHAXQ9H814 394 aaKnown RBP11.58□□□□□ -0.56
LCN1-201ENST00000263598 MYOZ2Q9NPC6 264 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.56
LCN1-201ENST00000263598 ADAMTS8Q9UP79 889 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 ZNF609O15014 1411 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 COL4A1P02462 1669 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 XDHP47989 1333 aa11.58□□□□□ -0.56
LCN1-201ENST00000263598 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
LCN1-201ENST00000263598 USP17L1Q7RTZ2 530 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 CTU1Q7Z7A3 348 aaKnown RBP11.57□□□□□ -0.56
LCN1-201ENST00000263598 RASAL3Q86YV0 1011 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
LCN1-201ENST00000263598 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
LCN1-201ENST00000263598 GNAI1P63096 354 aa11.56□□□□□ -0.56
LCN1-201ENST00000263598 CCDC85AQ96PX6 553 aaPredicted RBP11.56□□□□□ -0.56
LCN1-201ENST00000263598 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
LCN1-201ENST00000263598 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
LCN1-201ENST00000263598 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
LCN1-201ENST00000263598 SOX10P56693 466 aa11.55□□□□□ -0.56
LCN1-201ENST00000263598 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
LCN1-201ENST00000263598 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
LCN1-201ENST00000263598 GMLQ99445 158 aa11.55□□□□□ -0.56
LCN1-201ENST00000263598 METTL22Q9BUU2 404 aaPredicted RBP11.55□□□□□ -0.56
LCN1-201ENST00000263598 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
LCN1-201ENST00000263598 CTSWP56202 376 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
LCN1-201ENST00000263598 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 JARID2Q92833 1246 aaPredicted RBP11.54□□□□□ -0.56
LCN1-201ENST00000263598 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 SCN9AQ15858 1988 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 PAPPA2Q9BXP8 1791 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
LCN1-201ENST00000263598 NF2P35240 595 aa11.53□□□□□ -0.56
LCN1-201ENST00000263598 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
LCN1-201ENST00000263598 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
LCN1-201ENST00000263598 MAP3K2Q9Y2U5 619 aa11.53□□□□□ -0.56
LCN1-201ENST00000263598 POLR2AP24928 1970 aaKnown RBP11.53□□□□□ -0.56
LCN1-201ENST00000263598 MYO3BQ8WXR4 1341 aa11.53□□□□□ -0.56
LCN1-201ENST00000263598 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
LCN1-201ENST00000263598 UBE2Q2LH0YL09 131 aa11.52□□□□□ -0.57
LCN1-201ENST00000263598 APAF1O14727 1248 aa11.52□□□□□ -0.57
LCN1-201ENST00000263598 MMP14P50281 582 aa11.52□□□□□ -0.57
LCN1-201ENST00000263598 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms