RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 DDX11Q96FC9 970 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 MYCBPQ99417 103 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 NCKAP5LQ9HCH0 1330 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 ADCY9O60503 1353 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 MAGEA9P43362 315 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 RESTQ13127 1097 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 CYB5RLQ6IPT4 315 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 BLOC1S2Q6QNY1 142 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 IQUBQ8NA54 791 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 NCAPGQ9BPX3 1015 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 TTC41PQ6P2S7 1318 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 ATP7BP35670 1465 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 TOPAZ1Q8N9V7 1692 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 GLRX3O76003 335 aaKnown RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 IFIT2P09913 472 aaKnown RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 TRIM65Q6PJ69 517 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 PPP1R42Q7Z4L9 355 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 ERCC4Q92889 916 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 SIRT1Q96EB6 747 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 COG3Q96JB2 828 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 FUT8Q9BYC5 575 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 USP44Q9H0E7 712 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 GOLPH3LQ9H4A5 285 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 ARHGEF10O15013 1369 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 CHD2O14647 1828 aaKnown RBP8.4□□□□□ -1.06
CSDE1-201ENST00000261443 ZRSR1Q15695 479 aaKnown RBP8.4□□□□□ -1.06
CSDE1-201ENST00000261443 PACS2Q86VP3 889 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 BRF1Q92994 677 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 ZSCAN16Q9H4T2 348 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-201ENST00000261443 PEAK1Q9H792 1746 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 PARP3Q9Y6F1 533 aa8.4□□□□□ -1.06
CSDE1-201ENST00000261443 MMP14P50281 582 aa8.4□□□□□ -1.07
CSDE1-201ENST00000261443 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-201ENST00000261443 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-201ENST00000261443 PARD6BQ9BYG5 372 aa8.4□□□□□ -1.07
CSDE1-201ENST00000261443 CRB1P82279 1406 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 H3BQF6 201 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 SRGAP3O43295 1099 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 JAK2O60674 1132 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 GPATCH11Q8N954 259 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 DEF6Q9H4E7 631 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 VPS18Q9P253 973 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 SLC27A2O14975 620 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 FAM160A1Q05DH4 1040 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-201ENST00000261443 FMNL2Q96PY5 1086 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 RGPD1P0DJD0 1748 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 EIF3CLB5ME19 914 aaKnown RBP8.39□□□□□ -1.07
CSDE1-201ENST00000261443 FANCGO15287 622 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 RPS6KB1P23443 525 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 OS9Q13438 667 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-201ENST00000261443 LONRF2Q1L5Z9 754 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 CCDC30Q5VVM6 783 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 EIF3CQ99613 913 aaKnown RBP8.39□□□□□ -1.07
CSDE1-201ENST00000261443 SDF4Q9BRK5 362 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 HDAC5Q9UQL6 1122 aa8.39□□□□□ -1.07
CSDE1-201ENST00000261443 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 PSME1Q06323 249 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 POLA2Q14181 598 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 EIF4A2Q14240 407 aaKnown RBP8.38□□□□□ -1.07
CSDE1-201ENST00000261443 FSIP1Q8NA03 581 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
CSDE1-201ENST00000261443 FTOQ9C0B1 505 aaKnown RBP eCLIP8.38□□□□□ -1.07
CSDE1-201ENST00000261443 RCOR1Q9UKL0 485 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 APPP05067 770 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 ME1P48163 572 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 PSEN1P49768 467 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 FAM69CQ0P6D2 419 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 ENGASEQ8NFI3 743 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 RABGGTAQ92696 567 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 MPHOSPH8Q99549 860 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 TECPR2O15040 1411 aa8.38□□□□□ -1.07
CSDE1-201ENST00000261443 EDC4Q6P2E9 1401 aaKnown RBP8.38□□□□□ -1.07
CSDE1-201ENST00000261443 ZSCAN12O43309 604 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 SART3Q15020 963 aaKnown RBP8.37□□□□□ -1.07
CSDE1-201ENST00000261443 DPCR1Q3MIW9 517 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 HSP90AB4PQ58FF6 505 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 FOSBP53539 338 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 MAP3K9P80192 1104 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 MCM6Q14566 821 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 FOXR1Q6PIV2 292 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 RSRC2Q7L4I2 434 aaKnown RBP8.37□□□□□ -1.07
CSDE1-201ENST00000261443 GOLGA1Q92805 767 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 FAM227BQ96M60 508 aa8.37□□□□□ -1.07
CSDE1-201ENST00000261443 ALDH8A1Q9H2A2 487 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-201ENST00000261443 PDE11AQ9HCR9 933 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms