RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 G3BP1Q13283 466 aaKnown RBP eCLIP22.89■■□□□ 1.26
COL4A3BP-201ENST00000261415 CCDC57Q2TAC2 916 aa22.89■■□□□ 1.26
COL4A3BP-201ENST00000261415 HS1BP3Q53T59 392 aa22.89■■□□□ 1.26
COL4A3BP-201ENST00000261415 GREM2Q9H772 168 aa22.89■■□□□ 1.26
COL4A3BP-201ENST00000261415 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.25
COL4A3BP-201ENST00000261415 ERC1Q8IUD2 1116 aa22.89■■□□□ 1.25
COL4A3BP-201ENST00000261415 NRXN2Q9P2S2 1712 aa22.89■■□□□ 1.25
COL4A3BP-201ENST00000261415 TAF7LQ5H9L4 462 aa22.88■■□□□ 1.25
COL4A3BP-201ENST00000261415 C16orf71Q8IYS4 520 aaPredicted RBP22.88■■□□□ 1.25
COL4A3BP-201ENST00000261415 IL1RAPL2Q9NP60 686 aa22.88■■□□□ 1.25
COL4A3BP-201ENST00000261415 IFIT5Q13325 482 aaKnown RBP22.88■■□□□ 1.25
COL4A3BP-201ENST00000261415 LRP5O75197 1615 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 KIF20AO95235 890 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 TM4SF1P30408 202 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 ZNF594Q96JF6 807 aaPredicted RBP22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 NAP1L2Q9ULW6 460 aaPredicted RBP22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 SASH1O94885 1247 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 ITGA6P23229 1130 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 SLC10A5Q5PT55 438 aa22.87■■□□□ 1.25
COL4A3BP-201ENST00000261415 OTUD7AQ8TE49 926 aaPredicted RBP22.86■■□□□ 1.25
COL4A3BP-201ENST00000261415 R3HCC1Q9Y3T6 440 aaKnown RBP22.86■■□□□ 1.25
COL4A3BP-201ENST00000261415 GTPBP4Q9BZE4 634 aaKnown RBP22.85■■□□□ 1.25
COL4A3BP-201ENST00000261415 ANKRD31Q8N7Z5 1873 aa22.85■■□□□ 1.25
COL4A3BP-201ENST00000261415 A0A1B0GUL6 1792 aa22.85■■□□□ 1.25
COL4A3BP-201ENST00000261415 RTL9Q8NET4 1388 aa22.85■■□□□ 1.25
COL4A3BP-201ENST00000261415 UQCRHLA0A096LP55 91 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 ANKRD18BA2A2Z9 1011 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 UQCRHP07919 91 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 CCDC152Q4G0S7 254 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 PLEKHM2Q8IWE5 1019 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 CNBD1Q8NA66 436 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 CCDC94Q9BW85 323 aaPredicted RBP22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 NPHP1O15259 732 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 DDR1Q08345 913 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 AK9Q5TCS8 1911 aa22.84■■□□□ 1.25
COL4A3BP-201ENST00000261415 C3orf67Q6ZVT6 689 aa22.83■■□□□ 1.25
COL4A3BP-201ENST00000261415 CCDC24Q8N4L8 307 aa22.83■■□□□ 1.25
COL4A3BP-201ENST00000261415 COL4A1P02462 1669 aa22.83■■□□□ 1.25
COL4A3BP-201ENST00000261415 EYA2O00167 538 aa22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 ZNF500O60304 480 aaPredicted RBP22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 SERPINB2P05120 415 aa22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 CSPP1Q1MSJ5 1256 aa22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 ATG9AQ7Z3C6 839 aa22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.83■■□□□ 1.24
COL4A3BP-201ENST00000261415 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 POLRMTO00411 1230 aaKnown RBP22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 CIAO1O76071 339 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 RIC1Q4ADV7 1423 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 SF3B3Q15393 1217 aaKnown RBP22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 LRRC24Q50LG9 513 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 PRR5LQ6MZQ0 368 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 CLASRPQ8N2M8 674 aaKnown RBP22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 FBXO3Q9UK99 471 aa22.82■■□□□ 1.24
COL4A3BP-201ENST00000261415 ZSCAN20P17040 1043 aaPredicted RBP22.81■■□□□ 1.24
COL4A3BP-201ENST00000261415 GAS2L3Q86XJ1 694 aa22.81■■□□□ 1.24
COL4A3BP-201ENST00000261415 IPO4Q8TEX9 1081 aaKnown RBP22.81■■□□□ 1.24
COL4A3BP-201ENST00000261415 PUS3Q9BZE2 481 aaKnown RBP22.81■■□□□ 1.24
COL4A3BP-201ENST00000261415 IL15P40933 162 aaPredicted RBP22.8■■□□□ 1.24
COL4A3BP-201ENST00000261415 NLRP3Q96P20 1036 aa22.8■■□□□ 1.24
COL4A3BP-201ENST00000261415 SEC31BQ9NQW1 1179 aa22.8■■□□□ 1.24
COL4A3BP-201ENST00000261415 NASPP49321 788 aaPredicted RBP22.79■■□□□ 1.24
COL4A3BP-201ENST00000261415 TFCP2Q12800 502 aa22.79■■□□□ 1.24
COL4A3BP-201ENST00000261415 PPP4R3BQ5MIZ7 849 aa22.79■■□□□ 1.24
COL4A3BP-201ENST00000261415 MX1P20591 662 aa22.79■■□□□ 1.24
COL4A3BP-201ENST00000261415 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL4A3BP-201ENST00000261415 LETM1O95202 739 aaPredicted RBP22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 PDE1AP54750 535 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 LDHAL6AQ6ZMR3 332 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 ST5P78524 1137 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 GBP4Q96PP9 640 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 OSBPL3Q9H4L5 887 aa22.78■■□□□ 1.24
COL4A3BP-201ENST00000261415 AACSQ86V21 672 aa22.77■■□□□ 1.24
COL4A3BP-201ENST00000261415 EAF2Q96CJ1 260 aaPredicted RBP22.77■■□□□ 1.24
COL4A3BP-201ENST00000261415 MMP10P09238 476 aa22.77■■□□□ 1.23
COL4A3BP-201ENST00000261415 TAF3Q5VWG9 929 aa22.77■■□□□ 1.23
COL4A3BP-201ENST00000261415 PRDM10Q9NQV6 1147 aa22.77■■□□□ 1.23
COL4A3BP-201ENST00000261415 NOL7Q9UMY1 257 aaKnown RBP22.77■■□□□ 1.23
COL4A3BP-201ENST00000261415 CNNM1Q9NRU3 951 aa22.76■■□□□ 1.23
COL4A3BP-201ENST00000261415 RIPOR2Q9Y4F9 1068 aa22.76■■□□□ 1.23
COL4A3BP-201ENST00000261415 ARAP2Q8WZ64 1704 aa22.76■■□□□ 1.23
COL4A3BP-201ENST00000261415 IFIT2P09913 472 aaKnown RBP22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 TNNI3KQ59H18 835 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 TSHZ3Q63HK5 1081 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 STAP2Q9UGK3 403 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 FPGT-TNNI3KV9GXZ4 949 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 BMP2KLQ5H9B9 411 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 TTC22Q5TAA0 569 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 CDC5LQ99459 802 aaKnown RBP22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 PDGFDQ9GZP0 370 aaPredicted RBP22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 ZNF609O15014 1411 aa22.75■■□□□ 1.23
COL4A3BP-201ENST00000261415 SPRYD3Q8NCJ5 442 aa22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 COL11A2P13942 1736 aaPredicted RBP22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 GSPT1P15170 499 aaKnown RBP22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 MCM5P33992 734 aa22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 IGHMBP2P38935 993 aaKnown RBP22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 MPHOSPH8Q99549 860 aa22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 PARP3Q9Y6F1 533 aa22.74■■□□□ 1.23
COL4A3BP-201ENST00000261415 CACNA1SQ13698 1873 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms