RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 NEURL1BA8MQ27 555 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 UFL1O94874 794 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 TRPM7Q96QT4 1865 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 RASSF10A6NK89 507 aa24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 CTSWP56202 376 aa24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 WDR63Q8IWG1 891 aa24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 MICALL2Q8IY33 904 aa24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 GLIS2Q9BZE0 524 aaPredicted RBP24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 ZC3H12CQ9C0D7 883 aaKnown RBP24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 PODXL2Q9NZ53 605 aa24.37■■□□□ 1.49
TM6SF1-201ENST00000258909 EXOSC9Q06265 439 aaKnown RBP24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 FLIIQ13045 1269 aa24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 CST9Q5W186 159 aa24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 ANKRD18AQ8IVF6 992 aa24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 GGA1Q9UJY5 639 aa24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 MYH3P11055 1940 aa24.36■■□□□ 1.49
TM6SF1-201ENST00000258909 RTL9Q8NET4 1388 aa24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 H7C1D1 291 aa24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 VAMP4O75379 141 aa24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 TTLL11Q8NHH1 800 aa24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 SCN9AQ15858 1988 aa24.35■■□□□ 1.49
TM6SF1-201ENST00000258909 SPEF2Q9C093 1822 aa24.34■■□□□ 1.49
TM6SF1-201ENST00000258909 FKBP5Q13451 457 aaPredicted RBP24.34■■□□□ 1.49
TM6SF1-201ENST00000258909 SAMD7Q7Z3H4 446 aa24.34■■□□□ 1.49
TM6SF1-201ENST00000258909 UBE3BQ7Z3V4 1068 aa24.34■■□□□ 1.49
TM6SF1-201ENST00000258909 GREM2Q9H772 168 aa24.34■■□□□ 1.49
TM6SF1-201ENST00000258909 G3V3G9 751 aa24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 FOXN1O15353 648 aa24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 DCAF8Q5TAQ9 597 aa24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 PAXIP1Q6ZW49 1069 aaPredicted RBP24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 TNS4Q8IZW8 715 aa24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 PGAP2Q9UHJ9 254 aa24.33■■□□□ 1.49
TM6SF1-201ENST00000258909 WTIPA6NIX2 430 aaPredicted RBP24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 H7C1W4 665 aa24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 GRM1Q13255 1194 aa24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 DPF2Q92785 391 aa24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 WDR33Q9C0J8 1336 aaKnown RBP24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 EGFRP00533 1210 aa24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 RBM26Q5T8P6 1007 aaKnown RBP24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 DNAAF4Q8WXU2 420 aa24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 CDC5LQ99459 802 aaKnown RBP24.32■■□□□ 1.48
TM6SF1-201ENST00000258909 CACNA1FO60840 1977 aa24.31■■□□□ 1.48
TM6SF1-201ENST00000258909 XDHP47989 1333 aa24.31■■□□□ 1.48
TM6SF1-201ENST00000258909 CELF2O95319 508 aaKnown RBP24.31■■□□□ 1.48
TM6SF1-201ENST00000258909 GCKRQ14397 625 aa24.31■■□□□ 1.48
TM6SF1-201ENST00000258909 ZC3H15Q8WU90 426 aaKnown RBP24.31■■□□□ 1.48
TM6SF1-201ENST00000258909 DLK2Q6UY11 383 aa24.3■■□□□ 1.48
TM6SF1-201ENST00000258909 ZNF408Q9H9D4 720 aa24.3■■□□□ 1.48
TM6SF1-201ENST00000258909 POLR2AP24928 1970 aaKnown RBP24.29■■□□□ 1.48
TM6SF1-201ENST00000258909 CYP4F22Q6NT55 531 aa24.29■■□□□ 1.48
TM6SF1-201ENST00000258909 AIDAQ96BJ3 306 aa24.29■■□□□ 1.48
TM6SF1-201ENST00000258909 RPS12P25398 132 aaKnown RBP24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 CDC37L1Q7L3B6 337 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 USP48Q86UV5 1035 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 CAPNS2Q96L46 248 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 WBP1LQ9NX94 342 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 MINPP1Q9UNW1 487 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 TLL2Q9Y6L7 1015 aa24.28■■□□□ 1.48
TM6SF1-201ENST00000258909 F6X3S4 739 aa24.27■■□□□ 1.48
TM6SF1-201ENST00000258909 CAPN15O75808 1086 aa24.27■■□□□ 1.48
TM6SF1-201ENST00000258909 VIL1P09327 827 aaKnown RBP24.27■■□□□ 1.48
TM6SF1-201ENST00000258909 ATP2B4P23634 1241 aa24.27■■□□□ 1.48
TM6SF1-201ENST00000258909 BSDC1Q9NW68 430 aaPredicted RBP24.27■■□□□ 1.48
TM6SF1-201ENST00000258909 CASP7P55210 303 aa24.26■■□□□ 1.47
TM6SF1-201ENST00000258909 LINS1Q8NG48 757 aa24.26■■□□□ 1.47
TM6SF1-201ENST00000258909 MYH16Q9H6N6 1097 aa24.26■■□□□ 1.47
TM6SF1-201ENST00000258909 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
TM6SF1-201ENST00000258909 SAPCD2Q86UD0 394 aa24.25■■□□□ 1.47
TM6SF1-201ENST00000258909 ITGA6P23229 1130 aa24.24■■□□□ 1.47
TM6SF1-201ENST00000258909 PLA2G12BQ9BX93 195 aa24.24■■□□□ 1.47
TM6SF1-201ENST00000258909 IGHMBP2P38935 993 aaKnown RBP24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 ECE1P42892 770 aa24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 CTCFP49711 727 aaPredicted RBP24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 CCT4P50991 539 aaKnown RBP24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 KIF4BQ2VIQ3 1234 aa24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 RSBN1LQ6PCB5 846 aaPredicted RBP24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 PSME4Q14997 1843 aa24.23■■□□□ 1.47
TM6SF1-201ENST00000258909 ASTN2O75129 1339 aaPredicted RBP24.22■■□□□ 1.47
TM6SF1-201ENST00000258909 AOC2O75106 756 aa24.22■■□□□ 1.47
TM6SF1-201ENST00000258909 LBX1P52954 281 aa24.22■■□□□ 1.47
TM6SF1-201ENST00000258909 MAP2K1Q02750 393 aaPredicted RBP24.22■■□□□ 1.47
TM6SF1-201ENST00000258909 KRT26Q7Z3Y9 468 aa24.22■■□□□ 1.47
TM6SF1-201ENST00000258909 ADM5C9JUS6 153 aa24.21■■□□□ 1.47
TM6SF1-201ENST00000258909 CSF1RP07333 972 aa24.21■■□□□ 1.47
TM6SF1-201ENST00000258909 DCPSQ96C86 337 aaKnown RBP24.21■■□□□ 1.47
TM6SF1-201ENST00000258909 BEND3Q5T5X7 828 aa24.2■■□□□ 1.47
TM6SF1-201ENST00000258909 PODNQ7Z5L7 613 aa24.2■■□□□ 1.47
TM6SF1-201ENST00000258909 TXNRD3Q86VQ6 643 aa24.2■■□□□ 1.47
TM6SF1-201ENST00000258909 MED23Q9ULK4 1368 aa24.2■■□□□ 1.46
TM6SF1-201ENST00000258909 USP17L3A6NCW0 530 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 USP17L4A6NCW7 530 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 USP17L1Q7RTZ2 530 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 MPHOSPH8Q99549 860 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 MXD3Q9BW11 206 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 THSD7BQ9C0I4 1608 aa24.19■■□□□ 1.46
TM6SF1-201ENST00000258909 KLRK1P26718 216 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms