RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CIZ1Q9ULV3 898 aaPredicted RBP33.45■■■□□ 2.95
CCM2-201ENST00000258781 PDE8AO60658 829 aa33.44■■■□□ 2.94
CCM2-201ENST00000258781 HAUS7Q99871 368 aa33.44■■■□□ 2.94
CCM2-201ENST00000258781 PUS3Q9BZE2 481 aaKnown RBP33.44■■■□□ 2.94
CCM2-201ENST00000258781 SNRKQ9NRH2 765 aa33.44■■■□□ 2.94
CCM2-201ENST00000258781 CEP126Q9P2H0 1117 aa33.44■■■□□ 2.94
CCM2-201ENST00000258781 TAF7LQ5H9L4 462 aa33.44■■■□□ 2.94
CCM2-201ENST00000258781 HMGB2P26583 209 aaKnown RBP33.43■■■□□ 2.94
CCM2-201ENST00000258781 TFCP2L1Q9NZI6 479 aa33.42■■■□□ 2.94
CCM2-201ENST00000258781 SPEF2Q9C093 1822 aa33.42■■■□□ 2.94
CCM2-201ENST00000258781 CASZ1Q86V15 1759 aa33.42■■■□□ 2.94
CCM2-201ENST00000258781 HSP90AA1P07900 732 aaKnown RBP33.42■■■□□ 2.94
CCM2-201ENST00000258781 CCDC85AQ96PX6 553 aaPredicted RBP33.42■■■□□ 2.94
CCM2-201ENST00000258781 NEUROD6Q96NK8 337 aa33.41■■■□□ 2.94
CCM2-201ENST00000258781 AKAP2Q9Y2D5 859 aa33.41■■■□□ 2.94
CCM2-201ENST00000258781 NMIQ13287 307 aaPredicted RBP33.4■■■□□ 2.94
CCM2-201ENST00000258781 ANKRD18BA2A2Z9 1011 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 HCLS1P14317 486 aaPredicted RBP33.39■■■□□ 2.94
CCM2-201ENST00000258781 MCM2P49736 904 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 LRP5O75197 1615 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 A0A1B0GUL7 405 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 GYS1P13807 737 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 ITGA6P23229 1130 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 TICAM2Q86XR7 235 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 SETDB2Q96T68 719 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 GREM2Q9H772 168 aa33.39■■■□□ 2.94
CCM2-201ENST00000258781 NEK4P51957 841 aa33.38■■■□□ 2.93
CCM2-201ENST00000258781 TIMM10P62072 90 aa33.38■■■□□ 2.93
CCM2-201ENST00000258781 DEFB132Q7Z7B7 95 aa33.38■■■□□ 2.93
CCM2-201ENST00000258781 FRAT2O75474 233 aaPredicted RBP33.37■■■□□ 2.93
CCM2-201ENST00000258781 RIC1Q4ADV7 1423 aa33.37■■■□□ 2.93
CCM2-201ENST00000258781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.37■■■□□ 2.93
CCM2-201ENST00000258781 FAM227BQ96M60 508 aa33.37■■■□□ 2.93
CCM2-201ENST00000258781 ANO8Q9HCE9 1232 aaPredicted RBP33.37■■■□□ 2.93
CCM2-201ENST00000258781 CCDC171Q6TFL3 1326 aa33.36■■■□□ 2.93
CCM2-201ENST00000258781 MED23Q9ULK4 1368 aa33.36■■■□□ 2.93
CCM2-201ENST00000258781 SF3B2Q13435 895 aaKnown RBP33.35■■■□□ 2.93
CCM2-201ENST00000258781 NFIXQ14938 502 aa33.35■■■□□ 2.93
CCM2-201ENST00000258781 ERFEQ4G0M1 354 aa33.35■■■□□ 2.93
CCM2-201ENST00000258781 HSP90B1P14625 803 aaKnown RBP33.35■■■□□ 2.93
CCM2-201ENST00000258781 COL23A1Q86Y22 540 aaPredicted RBP33.35■■■□□ 2.93
CCM2-201ENST00000258781 DNAJC2Q99543 621 aaKnown RBP33.35■■■□□ 2.93
CCM2-201ENST00000258781 RIPOR2Q9Y4F9 1068 aa33.35■■■□□ 2.93
CCM2-201ENST00000258781 ABCC12Q96J65 1359 aa33.34■■■□□ 2.93
CCM2-201ENST00000258781 EDC3Q96F86 508 aaKnown RBP33.34■■■□□ 2.93
CCM2-201ENST00000258781 SNX14Q9Y5W7 946 aa33.34■■■□□ 2.93
CCM2-201ENST00000258781 A0A0D9SFI3 127 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 BAG6P46379 1132 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 PTH1RQ03431 593 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 LDHAL6AQ6ZMR3 332 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 KCNB2Q92953 911 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 PNPLA7Q6ZV29 1317 aa33.33■■■□□ 2.93
CCM2-201ENST00000258781 NBPF5PQ86XG9 351 aaPredicted RBP33.32■■■□□ 2.92
CCM2-201ENST00000258781 KBTBD3Q8NAB2 608 aa33.32■■■□□ 2.92
CCM2-201ENST00000258781 CARMIL3Q8ND23 1372 aa33.32■■■□□ 2.92
CCM2-201ENST00000258781 MAP4K1Q92918 833 aa33.3■■■□□ 2.92
CCM2-201ENST00000258781 NYXQ9GZU5 481 aa33.3■■■□□ 2.92
CCM2-201ENST00000258781 PAG1Q9NWQ8 432 aa33.3■■■□□ 2.92
CCM2-201ENST00000258781 METTL24Q5JXM2 366 aa33.29■■■□□ 2.92
CCM2-201ENST00000258781 RTL9Q8NET4 1388 aa33.29■■■□□ 2.92
CCM2-201ENST00000258781 IFIT1P09914 478 aaKnown RBP33.29■■■□□ 2.92
CCM2-201ENST00000258781 CCDC158Q5M9N0 1113 aa33.29■■■□□ 2.92
CCM2-201ENST00000258781 C3orf67Q6ZVT6 689 aa33.29■■■□□ 2.92
CCM2-201ENST00000258781 CNNM1Q9NRU3 951 aa33.29■■■□□ 2.92
CCM2-201ENST00000258781 CCDC24Q8N4L8 307 aa33.28■■■□□ 2.92
CCM2-201ENST00000258781 XAGE2Q96GT9 111 aa33.28■■■□□ 2.92
CCM2-201ENST00000258781 FOXD4L1Q9NU39 408 aa33.28■■■□□ 2.92
CCM2-201ENST00000258781 NDUFB9Q9Y6M9 179 aa33.28■■■□□ 2.92
CCM2-201ENST00000258781 QSER1Q2KHR3 1735 aa33.27■■■□□ 2.92
CCM2-201ENST00000258781 GTF2E1P29083 439 aaPredicted RBP33.27■■■□□ 2.92
CCM2-201ENST00000258781 NECTIN1Q15223 517 aa33.27■■■□□ 2.92
CCM2-201ENST00000258781 SLC15A2Q16348 729 aa33.27■■■□□ 2.92
CCM2-201ENST00000258781 DDX46Q7L014 1031 aaKnown RBP33.27■■■□□ 2.92
CCM2-201ENST00000258781 RASEFQ8IZ41 740 aa33.27■■■□□ 2.92
CCM2-201ENST00000258781 TNRC6CQ9HCJ0 1690 aaKnown RBP33.27■■■□□ 2.92
CCM2-201ENST00000258781 ATP2B3Q16720 1220 aa33.27■■■□□ 2.92
CCM2-201ENST00000258781 ARAP2Q8WZ64 1704 aa33.26■■■□□ 2.92
CCM2-201ENST00000258781 TM4SF1P30408 202 aa33.26■■■□□ 2.91
CCM2-201ENST00000258781 GORABQ5T7V8 394 aa33.26■■■□□ 2.91
CCM2-201ENST00000258781 TPTE2Q6XPS3 522 aa33.26■■■□□ 2.91
CCM2-201ENST00000258781 VGLL2Q8N8G2 317 aa33.26■■■□□ 2.91
CCM2-201ENST00000258781 CWC22Q9HCG8 908 aaKnown RBP33.26■■■□□ 2.91
CCM2-201ENST00000258781 RBM8AQ9Y5S9 174 aaKnown RBP33.26■■■□□ 2.91
CCM2-201ENST00000258781 COL4A1P02462 1669 aa33.26■■■□□ 2.91
CCM2-201ENST00000258781 GOLIM4O00461 696 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 RAB3GAP1Q15042 981 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 SLC10A5Q5PT55 438 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 FLAD1Q8NFF5 587 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 UPF3BQ9BZI7 483 aaKnown RBP33.25■■■□□ 2.91
CCM2-201ENST00000258781 TAF1P21675 1872 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 ADORA1P30542 326 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 TTC39AQ5SRH9 613 aa33.25■■■□□ 2.91
CCM2-201ENST00000258781 PRPF40BQ6NWY9 871 aaKnown RBP33.24■■■□□ 2.91
CCM2-201ENST00000258781 TMX3Q96JJ7 454 aa33.24■■■□□ 2.91
CCM2-201ENST00000258781 TM6SF1Q9BZW5 370 aa33.24■■■□□ 2.91
CCM2-201ENST00000258781 DDR1Q08345 913 aa33.23■■■□□ 2.91
CCM2-201ENST00000258781 CCDC152Q4G0S7 254 aa33.23■■■□□ 2.91
CCM2-201ENST00000258781 SEC31BQ9NQW1 1179 aa33.23■■■□□ 2.91
CCM2-201ENST00000258781 MROH5Q6ZUA9 1318 aa33.23■■■□□ 2.91
CCM2-201ENST00000258781 ZNF589Q86UQ0 364 aaPredicted RBP33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms