RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DZIP1Q86YF9 867 aaKnown RBP8.93□□□□□ -0.98
GPNMB-201ENST00000258733 TRIM4Q9C037 500 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 TTC12Q9H892 705 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-201ENST00000258733 EXOC1Q9NV70 894 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 FHOD1Q9Y613 1164 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 SETD1BQ9UPS6 1966 aaKnown RBP8.93□□□□□ -0.98
GPNMB-201ENST00000258733 PCF11O94913 1555 aaKnown RBP8.92□□□□□ -0.98
GPNMB-201ENST00000258733 DIP2BQ9P265 1576 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 SEC24BO95487 1268 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 KIAA0753Q2KHM9 967 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 GABPB2Q8TAK5 448 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-201ENST00000258733 KAT2BQ92831 832 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 GPATCH3Q96I76 525 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 CAPS2Q9BXY5 557 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 INO80BQ9C086 356 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-201ENST00000258733 SAMD9Q5K651 1589 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 MYOM3Q5VTT5 1437 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 TRIM37O94972 964 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 ATICP31939 592 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 FILIP1Q7Z7B0 1213 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 RPAP2Q8IXW5 612 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-201ENST00000258733 PDILTQ8N807 584 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 CCDC112Q8NEF3 446 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 RSRC1Q96IZ7 334 aaKnown RBP8.92□□□□□ -0.98
GPNMB-201ENST00000258733 MPP4Q96JB8 637 aa8.92□□□□□ -0.98
GPNMB-201ENST00000258733 SPDYE3A6NKU9 549 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 ENO4A6NNW6 628 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 SKAP2O75563 359 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 ERLIN2O94905 339 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CCDC92Q53HC0 331 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 SMUG1Q53HV7 270 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CC2D1AQ6P1N0 951 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 ARHGAP22Q7Z5H3 698 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 REXO1L1PQ8IX06 675 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CLIP3Q96DZ5 547 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 TBC1D32Q96NH3 1257 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 THUMPD2Q9BTF0 503 aaKnown RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 SEL1LQ9UBV2 794 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CIZ1Q9ULV3 898 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 EXOC6BQ9Y2D4 811 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 DYTNA2CJ06 578 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 PNMA6AP0CW24 399 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 PDE4BQ07343 736 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 C4orf46Q504U0 113 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 STK31Q9BXU1 1019 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 DNAAF2Q9NVR5 837 aaKnown RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 RCAN3Q9UKA8 241 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 U3KPZ7 1027 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
GPNMB-201ENST00000258733 TSPY4P0CV99 314 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 TSPY10P0CW01 314 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 LMAN1P49257 510 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 CLCN2P51788 898 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 WAPLQ7Z5K2 1190 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 PEX5LQ8IYB4 626 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 SLC35B4Q969S0 331 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 VMP1Q96GC9 406 aa8.91□□□□□ -0.98
GPNMB-201ENST00000258733 SHROOM2Q13796 1616 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 ERC2O15083 957 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 BBOX1O75936 387 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 DDIT3P35638 169 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 DDR1Q08345 913 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
GPNMB-201ENST00000258733 AGAP9Q5VTM2 703 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 CAVIN1Q6NZI2 390 aaKnown RBP8.9□□□□□ -0.98
GPNMB-201ENST00000258733 GIMAP1Q8WWP7 306 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
GPNMB-201ENST00000258733 SNX21Q969T3 373 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 PARD6BQ9BYG5 372 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 PPP1R1BQ9UD71 204 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-201ENST00000258733 FHAD1B1AJZ9 1412 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 SPATA31D1Q6ZQQ2 1576 aa8.9□□□□□ -0.98
GPNMB-201ENST00000258733 TRIM21P19474 475 aaKnown RBP8.9□□□□□ -0.99
GPNMB-201ENST00000258733 RPL13P26373 211 aaKnown RBP8.9□□□□□ -0.99
GPNMB-201ENST00000258733 LRRC23Q53EV4 343 aaPredicted RBP8.9□□□□□ -0.99
GPNMB-201ENST00000258733 NUP133Q8WUM0 1156 aa8.9□□□□□ -0.99
GPNMB-201ENST00000258733 INCENPQ9NQS7 918 aa8.9□□□□□ -0.99
GPNMB-201ENST00000258733 COMMD8Q9NX08 183 aa8.9□□□□□ -0.99
GPNMB-201ENST00000258733 SPO11Q9Y5K1 396 aa8.9□□□□□ -0.99
GPNMB-201ENST00000258733 M0R2C6 588 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 RPS6KA5O75582 802 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 FGFR1OPO95684 399 aaKnown RBP8.89□□□□□ -0.99
GPNMB-201ENST00000258733 HDAC4P56524 1084 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 Q4G0T1 1027 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 SEPT14Q6ZU15 432 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 IQCA1Q86XH1 822 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 CEP57L1Q8IYX8 460 aa8.89□□□□□ -0.99
GPNMB-201ENST00000258733 RETREG2Q8NC44 543 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms