RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 TDRD7Q8NHU6 1098 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC183Q5T5S1 534 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 B4GALNT2Q8NHY0 566 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 KLHDC4Q8TBB5 520 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 FBXO9Q9UK97 447 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MACROD2A1Z1Q3 448 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 TACC1O75410 805 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 RPSAP08865 295 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MSL3P1P0C860 447 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC6Q16204 474 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 CCAR1Q8IX12 1150 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 TMCO5AQ8N6Q1 288 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC150Q8NCX0 1101 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 IQSEC3Q9UPP2 1182 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 RIPOR2Q9Y4F9 1068 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MAP3K7CLP57077 242 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 GSDMDP57764 484 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 FOXD4Q12950 439 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 LONRF3Q496Y0 759 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MYSM1Q5VVJ2 828 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 TMEM132EQ6IEE7 984 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 SUGP1Q8IWZ8 645 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MIS18AQ9NYP9 233 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 HNRNPCP07910 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 SLFN14P0C7P3 912 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 DMPKQ09013 629 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 RUFY3Q7L099 469 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ZBTB10Q96DT7 871 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ENO4A6NNW6 628 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 MYBPC2Q14324 1141 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 MIER3Q7Z3K6 550 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ATP6V0A1Q93050 837 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 NDUFAB1O14561 156 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 THEMISQ8N1K5 641 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 FAM81BQ96LP2 452 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ZC4H2Q9NQZ6 224 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 A2MP01023 1474 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 OPA1O60313 960 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 PSMD6Q15008 389 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 PPP1R12CQ9BZL4 782 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 TRIM7Q9C029 511 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 DIAPH1O60610 1272 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ATP2C2O75185 946 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 POLE2P56282 527 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 BASP1P80723 227 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 SMCR8Q8TEV9 937 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ATRIPQ8WXE1 791 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 SH3GL1Q99961 368 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 TRMT1Q9NXH9 659 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 SFPQP23246 707 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 TSPYL2Q9H2G4 693 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDGFRA-201ENST00000257290 DDX46Q7L014 1031 aaKnown RBP7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.67□□□□□ -1.181e-6■■■■■ 44.5
PDGFRA-201ENST00000257290 CABP2Q9NPB3 220 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 DKK3Q9UBP4 350 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 ARHGEF5Q12774 1597 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 TRAPPC8Q9Y2L5 1435 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 RFC1P35251 1148 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 PRIM1P49642 420 aaKnown RBP7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 ZNF445P59923 1031 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 HAUS1Q96CS2 278 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 DRC3Q9H069 523 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 KRT38O76015 456 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 GOLGA1Q92805 767 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 CFAP74Q9C0B2 1584 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 ATP11AP98196 1134 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 TRIM58Q8NG06 486 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 KIF9Q9HAQ2 790 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 CTNNA3Q9UI47 895 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 MAGI3Q5TCQ9 1506 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 EIF2AK4Q9P2K8 1649 aaKnown RBP7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC174Q6PII3 467 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 TXNDC2Q86VQ3 553 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 ANKS4BQ8N8V4 417 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 STAG1Q8WVM7 1258 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 RABL2AQ9UBK7 228 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 BAIAP2L1Q9UHR4 511 aa7.67□□□□□ -1.18
PDGFRA-201ENST00000257290 GCC2Q8IWJ2 1684 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 AP1G2O75843 785 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 NEK2P51955 445 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 FKBP5Q13451 457 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 RASIP1Q5U651 963 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 RUNDC1Q96C34 613 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 RALGAPBQ86X10 1494 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 PLEKHH1Q9ULM0 1364 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 MYO1BO43795 1136 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 GBP1P32455 592 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 PDE1CQ14123 709 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 ARHGAP22Q7Z5H3 698 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 SCAF11Q99590 1463 aaKnown RBP7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 KIAA0753Q2KHM9 967 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 Q4G0T1 1027 aa7.66□□□□□ -1.18
PDGFRA-201ENST00000257290 MCM2P49736 904 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms