RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BIN2Q9UBW5 565 aaPredicted RBP15.62■□□□□ 0.09
PRPF38A-201ENST00000257181 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 SIK1P57059 783 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 GJD4Q96KN9 370 aaPredicted RBP15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 PDCL3Q9H2J4 239 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 ZNHIT6Q9NWK9 470 aaKnown RBP15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 PAF1Q8N7H5 531 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 DRC1Q96MC2 740 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 SULF1Q8IWU6 871 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 KCNG1Q9UIX4 513 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 ROBO2Q9HCK4 1378 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 GOLGA8AA7E2F4 631 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 GOLGA8BA8MQT2 603 aa15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 CWC27Q6UX04 472 aaKnown RBP15.61■□□□□ 0.09
PRPF38A-201ENST00000257181 KRT85P78386 507 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 BOLA2Q9H3K6 86 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 LEMD3Q9Y2U8 911 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 CDK12Q9NYV4 1490 aaPredicted RBP15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 IGSF3O75054 1194 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 JAKMIP1Q96N16 626 aaKnown RBP15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 CDR1P51861 262 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 SUPT20HL1Q3ZLR7 823 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 CETN1Q12798 172 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 ARMC9Q7Z3E5 817 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
PRPF38A-201ENST00000257181 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 MYO3BQ8WXR4 1341 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 LPIN2Q92539 896 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 GOPCQ9HD26 462 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 CBFA2T2O43439 604 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 MCM5P33992 734 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
PRPF38A-201ENST00000257181 NPR1P16066 1061 aa15.58■□□□□ 0.09
PRPF38A-201ENST00000257181 CALML3P27482 149 aa15.58■□□□□ 0.09
PRPF38A-201ENST00000257181 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.09
PRPF38A-201ENST00000257181 ZBED4O75132 1171 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 NLRP5P59047 1200 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 CRB1P82279 1406 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 EYA2O00167 538 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 GOLIM4O00461 696 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 TRIM37O94972 964 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 VTI1AQ96AJ9 217 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 RHPN1Q8TCX5 695 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 EXOC6BQ9Y2D4 811 aa15.58■□□□□ 0.08
PRPF38A-201ENST00000257181 CETN2P41208 172 aa15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 LZTS2Q9BRK4 669 aa15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 CLTCQ00610 1675 aaKnown RBP15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 TMEM67Q5HYA8 995 aa15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 TCP11L1Q9NUJ3 509 aa15.57■□□□□ 0.08
PRPF38A-201ENST00000257181 BMS1Q14692 1282 aaKnown RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 WTAPQ15007 396 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 INO80Q9ULG1 1556 aaPredicted RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 CCNA1P78396 465 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 RIMS1Q86UR5 1692 aaKnown RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 HELLSQ9NRZ9 838 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 AOX1Q06278 1338 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 RRP36Q96EU6 259 aaKnown RBP15.56■□□□□ 0.08
PRPF38A-201ENST00000257181 BARGINQ6ZT62 677 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 TEX11Q8IYF3 940 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 SMARCC2Q8TAQ2 1214 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 IQCA1LA6NCM1 817 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 RNF113AO15541 343 aaKnown RBP15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 SSFA2P28290 1259 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 F6X3S4 739 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 ITGA6P23229 1130 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 LARP1BQ659C4 914 aaKnown RBP15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 KANK3Q6NY19 840 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 LPXNO60711 386 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 GCKRQ14397 625 aa15.55■□□□□ 0.08
PRPF38A-201ENST00000257181 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 GPHNQ9NQX3 736 aaPredicted RBP15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 XDHP47989 1333 aa15.54■□□□□ 0.08
PRPF38A-201ENST00000257181 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms