RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
LRFN1-201ENST00000248668 FGD1P98174 961 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 PI16Q6UXB8 463 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 FOSBP53539 338 aa18.77■□□□□ 0.6
LRFN1-201ENST00000248668 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
LRFN1-201ENST00000248668 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
LRFN1-201ENST00000248668 NAP1L2Q9ULW6 460 aaPredicted RBP18.77■□□□□ 0.6
LRFN1-201ENST00000248668 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
LRFN1-201ENST00000248668 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
LRFN1-201ENST00000248668 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
LRFN1-201ENST00000248668 LRSAM1Q6UWE0 723 aa18.76■□□□□ 0.59
LRFN1-201ENST00000248668 CDC37L1Q7L3B6 337 aa18.76■□□□□ 0.59
LRFN1-201ENST00000248668 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
LRFN1-201ENST00000248668 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 JAK2O60674 1132 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 Q6ZUG5 572 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 SCARF1Q14162 830 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
LRFN1-201ENST00000248668 EXOC5O00471 708 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
LRFN1-201ENST00000248668 STOX1Q6ZVD7 989 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 TTLL5Q6EMB2 1281 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 XAGE2Q96GT9 111 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
LRFN1-201ENST00000248668 WASHC4Q2M389 1173 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 BRF1Q92994 677 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 GREM2Q9H772 168 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 SHANK3Q9BYB0 1731 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
LRFN1-201ENST00000248668 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
LRFN1-201ENST00000248668 MAP3K15Q6ZN16 1313 aa18.73■□□□□ 0.59
LRFN1-201ENST00000248668 ESPNB1AK53 854 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 ABCA3Q99758 1704 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 NUTM2BA6NNL0 878 aaPredicted RBP18.72■□□□□ 0.59
LRFN1-201ENST00000248668 NUTM2EB1AL46 878 aaPredicted RBP18.72■□□□□ 0.59
LRFN1-201ENST00000248668 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 NUTM2AQ8IVF1 878 aaPredicted RBP18.72■□□□□ 0.59
LRFN1-201ENST00000248668 M0R2C6 588 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 HAND2P61296 217 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 CCDC173Q0VFZ6 552 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 GIGYF2Q6Y7W6 1299 aaKnown RBP18.72■□□□□ 0.59
LRFN1-201ENST00000248668 LDHAL6AQ6ZMR3 332 aa18.72■□□□□ 0.59
LRFN1-201ENST00000248668 ZBTB38Q8NAP3 1195 aaPredicted RBP18.72■□□□□ 0.59
LRFN1-201ENST00000248668 PCCAP05165 728 aaPredicted RBP18.71■□□□□ 0.59
LRFN1-201ENST00000248668 ITGA6P23229 1130 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 CCDC158Q5M9N0 1113 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 NLRP10Q86W26 655 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 TJP1Q07157 1748 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 MAST3O60307 1309 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 CYP19A1P11511 503 aaPredicted RBP18.71■□□□□ 0.59
LRFN1-201ENST00000248668 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
LRFN1-201ENST00000248668 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
LRFN1-201ENST00000248668 TFIP11Q9UBB9 837 aaKnown RBP18.71■□□□□ 0.59
LRFN1-201ENST00000248668 HELBQ8NG08 1087 aaPredicted RBP18.7■□□□□ 0.58
LRFN1-201ENST00000248668 OSBP2Q969R2 916 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 ATP6V1DQ9Y5K8 247 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 HSPD1P10809 573 aaKnown RBP18.7■□□□□ 0.58
LRFN1-201ENST00000248668 ZAP70P43403 619 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
LRFN1-201ENST00000248668 CCT2P78371 535 aaKnown RBP18.7■□□□□ 0.58
LRFN1-201ENST00000248668 KRT32Q14532 448 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 ZMYM1Q5SVZ6 1142 aa18.7■□□□□ 0.58
LRFN1-201ENST00000248668 IRS4O14654 1257 aaPredicted RBP18.69■□□□□ 0.58
LRFN1-201ENST00000248668 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
LRFN1-201ENST00000248668 CIAO1O76071 339 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 MPNDQ8N594 471 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 TSPY26PQ9H489 355 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 SNAP23O00161 211 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 APOBRQ0VD83 1088 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 DZIP3Q86Y13 1208 aaKnown RBP18.69■□□□□ 0.58
LRFN1-201ENST00000248668 JCADQ9P266 1359 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
LRFN1-201ENST00000248668 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
LRFN1-201ENST00000248668 TAOK2Q9UL54 1235 aa18.68■□□□□ 0.58
LRFN1-201ENST00000248668 UBE2HP62256 183 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 TSGA10IPQ3SY00 556 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 NCOA5Q9HCD5 579 aaKnown RBP18.67■□□□□ 0.58
LRFN1-201ENST00000248668 HCLS1P14317 486 aaPredicted RBP18.67■□□□□ 0.58
LRFN1-201ENST00000248668 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
LRFN1-201ENST00000248668 HELLSQ9NRZ9 838 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 GIMAP6Q6P9H5 292 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
LRFN1-201ENST00000248668 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
LRFN1-201ENST00000248668 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
LRFN1-201ENST00000248668 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
LRFN1-201ENST00000248668 PPP1R9BQ96SB3 815 aa18.66■□□□□ 0.58
LRFN1-201ENST00000248668 AKAP2Q9Y2D5 859 aa18.66■□□□□ 0.58
LRFN1-201ENST00000248668 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
LRFN1-201ENST00000248668 CTSWP56202 376 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms