RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
PTPN12-201ENST00000248594 CCDC12Q8WUD4 166 aaPredicted RBP21.21■□□□□ 0.99
PTPN12-201ENST00000248594 BICC1Q9H694 974 aaKnown RBP21.21■□□□□ 0.99
PTPN12-201ENST00000248594 ATG3Q9NT62 314 aa21.21■□□□□ 0.99
PTPN12-201ENST00000248594 CCDC93Q567U6 631 aa21.21■□□□□ 0.99
PTPN12-201ENST00000248594 WDR24Q96S15 920 aa21.21■□□□□ 0.99
PTPN12-201ENST00000248594 ANXA1P04083 346 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 CCDC158Q5M9N0 1113 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 RUFY2Q8WXA3 655 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 EXOC4Q96A65 974 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 EFCAB8A8MWE9 144 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 IVLP07476 585 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 ATP2B1P20020 1258 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 EIF2S2P20042 333 aaKnown RBP21.2■□□□□ 0.98
PTPN12-201ENST00000248594 PSEN1P49768 467 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 COG3Q96JB2 828 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 SPHKAPQ2M3C7 1700 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 CCDC150Q8NCX0 1101 aa21.2■□□□□ 0.98
PTPN12-201ENST00000248594 IRX2Q9BZI1 471 aaPredicted RBP21.2■□□□□ 0.98
PTPN12-201ENST00000248594 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
PTPN12-201ENST00000248594 CLGNO14967 610 aa21.19■□□□□ 0.98
PTPN12-201ENST00000248594 MROH1Q8NDA8 1641 aa21.19■□□□□ 0.98
PTPN12-201ENST00000248594 CCT2P78371 535 aaKnown RBP21.19■□□□□ 0.98
PTPN12-201ENST00000248594 JAKMIP3Q5VZ66 844 aa21.19■□□□□ 0.98
PTPN12-201ENST00000248594 SARM1Q6SZW1 724 aa21.19■□□□□ 0.98
PTPN12-201ENST00000248594 TFRCP02786 760 aaKnown RBP21.18■□□□□ 0.98
PTPN12-201ENST00000248594 FUT8Q9BYC5 575 aa21.18■□□□□ 0.98
PTPN12-201ENST00000248594 PPM1EQ8WY54 764 aa21.18■□□□□ 0.98
PTPN12-201ENST00000248594 LZTFL1Q9NQ48 299 aa21.18■□□□□ 0.98
PTPN12-201ENST00000248594 TTC21AQ8NDW8 1320 aa21.18■□□□□ 0.98
PTPN12-201ENST00000248594 FANCGO15287 622 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 DHX58Q96C10 678 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 CXorf56Q9H5V9 222 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 CFAP45Q9UL16 551 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 FLIIQ13045 1269 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 ANKRD20A12PQ8NF67 263 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 MAP2K2P36507 400 aa21.17■□□□□ 0.98
PTPN12-201ENST00000248594 SALL3Q9BXA9 1300 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 ECM2O94769 699 aaPredicted RBP21.16■□□□□ 0.98
PTPN12-201ENST00000248594 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 HINFPQ9BQA5 517 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 ZSWIM6Q9HCJ5 1215 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 PARP3Q9Y6F1 533 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 TPM1P09493 284 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 IL13P35225 146 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 CNNM3Q8NE01 707 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 CCDC91Q7Z6B0 441 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 VWDEQ8N2E2 1590 aa21.16■□□□□ 0.98
PTPN12-201ENST00000248594 UBASH3AP57075 661 aa21.15■□□□□ 0.98
PTPN12-201ENST00000248594 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
PTPN12-201ENST00000248594 BRMS1Q9HCU9 246 aa21.15■□□□□ 0.98
PTPN12-201ENST00000248594 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
PTPN12-201ENST00000248594 PPARDQ03181 441 aa21.15■□□□□ 0.98
PTPN12-201ENST00000248594 PI4K2BQ8TCG2 481 aa21.15■□□□□ 0.98
PTPN12-201ENST00000248594 SEC62Q99442 399 aaKnown RBP21.15■□□□□ 0.98
PTPN12-201ENST00000248594 SSH2Q76I76 1423 aa21.15■□□□□ 0.98
PTPN12-201ENST00000248594 OTUD7BQ6GQQ9 843 aa21.14■□□□□ 0.98
PTPN12-201ENST00000248594 GOLGA1Q92805 767 aa21.14■□□□□ 0.98
PTPN12-201ENST00000248594 STAP2Q9UGK3 403 aa21.14■□□□□ 0.98
PTPN12-201ENST00000248594 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
PTPN12-201ENST00000248594 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
PTPN12-201ENST00000248594 TOP1P11387 765 aaKnown RBP21.14■□□□□ 0.97
PTPN12-201ENST00000248594 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.97
PTPN12-201ENST00000248594 CAVIN2O95810 425 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 TDO2P48775 406 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 FANCCQ00597 558 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 NBPF6Q5VWK0 638 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 FBXW10Q5XX13 1052 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 DPF2Q92785 391 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 NBPF4Q96M43 638 aa21.14■□□□□ 0.97
PTPN12-201ENST00000248594 CCDC172P0C7W6 258 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 CPLX3Q8WVH0 158 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 CEP83Q9Y592 693 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 REREQ9P2R6 1566 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 WDHD1O75717 1129 aaPredicted RBP21.13■□□□□ 0.97
PTPN12-201ENST00000248594 PSMA5P28066 241 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 ADKP55263 362 aaKnown RBP21.13■□□□□ 0.97
PTPN12-201ENST00000248594 FSD1Q9BTV5 496 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 CCDC8Q9H0W5 538 aaPredicted RBP21.13■□□□□ 0.97
PTPN12-201ENST00000248594 BOLA2Q9H3K6 86 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 PA2G4Q9UQ80 394 aaKnown RBP21.13■□□□□ 0.97
PTPN12-201ENST00000248594 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 TMEM232C9JQI7 657 aa21.13■□□□□ 0.97
PTPN12-201ENST00000248594 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
PTPN12-201ENST00000248594 TULP4Q9NRJ4 1543 aa21.12■□□□□ 0.97
PTPN12-201ENST00000248594 H0YHG0 523 aa21.12■□□□□ 0.97
PTPN12-201ENST00000248594 NMIQ13287 307 aaPredicted RBP21.12■□□□□ 0.97
PTPN12-201ENST00000248594 TRIM65Q6PJ69 517 aa21.12■□□□□ 0.97
PTPN12-201ENST00000248594 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
PTPN12-201ENST00000248594 RBM43Q6ZSC3 357 aaKnown RBP21.11■□□□□ 0.97
PTPN12-201ENST00000248594 FAM204AQ9H8W3 233 aa21.11■□□□□ 0.97
PTPN12-201ENST00000248594 BCCIPQ9P287 314 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTPN12-201ENST00000248594 SUFUQ9UMX1 484 aa21.11■□□□□ 0.97
PTPN12-201ENST00000248594 AKAP2Q9Y2D5 859 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms