RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
FAM78A-201ENST00000247295 SNX21Q969T3 373 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 USP26Q9BXU7 913 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
FAM78A-201ENST00000247295 CAPN2P17655 700 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 RXRAP19793 462 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 ANAPC15P60006 121 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
FAM78A-201ENST00000247295 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 JAG2Q9Y219 1238 aa13.06□□□□□ -0.32
FAM78A-201ENST00000247295 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 DNMT1P26358 1616 aaKnown RBP13.05□□□□□ -0.32
FAM78A-201ENST00000247295 CTAGE5O15320 804 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
FAM78A-201ENST00000247295 ZBTB43O43298 467 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 PHACTR2O75167 634 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 ZSCAN12O43309 604 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 NBPF7P0C2Y1 421 aaPredicted RBP13.05□□□□□ -0.32
FAM78A-201ENST00000247295 LIG1P18858 919 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
FAM78A-201ENST00000247295 IP6K1Q92551 441 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 ALG1Q9BT22 464 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 GNG11P61952 73 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 DDX17Q92841 729 aaKnown RBP13.05□□□□□ -0.32
FAM78A-201ENST00000247295 CHL1O00533 1208 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 F13A1P00488 732 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 WTAPQ15007 396 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 CREB3L3Q68CJ9 461 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 GBP3Q9H0R5 595 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 SLC4A4Q9Y6R1 1079 aa13.05□□□□□ -0.32
FAM78A-201ENST00000247295 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
FAM78A-201ENST00000247295 SLU7O95391 586 aaKnown RBP13.04□□□□□ -0.32
FAM78A-201ENST00000247295 RFC4P35249 363 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 DDX21Q9NR30 783 aaKnown RBP eCLIP13.04□□□□□ -0.32
FAM78A-201ENST00000247295 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 ARFGAP3Q9NP61 516 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 IL2RBP14784 551 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 UBA7P41226 1012 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 STX1AQ16623 288 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
FAM78A-201ENST00000247295 ANO6Q4KMQ2 910 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 CCDC102BQ68D86 513 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 DNAJC25Q9H1X3 360 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 PRC1O43663 620 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 AFMP43652 599 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■■■■■ 76.9
FAM78A-201ENST00000247295 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 SYKP43405 635 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 NEMFO60524 1076 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 DDB1Q16531 1140 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
FAM78A-201ENST00000247295 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
FAM78A-201ENST00000247295 PTPRTO14522 1441 aa13.02□□□□□ -0.32
FAM78A-201ENST00000247295 ZFYP08048 801 aaPredicted RBP13.02□□□□□ -0.32
FAM78A-201ENST00000247295 TERF1P54274 439 aa13.02□□□□□ -0.32
FAM78A-201ENST00000247295 PDE4BQ07343 736 aa13.02□□□□□ -0.32
FAM78A-201ENST00000247295 ZNF790Q6PG37 636 aa13.02□□□□□ -0.32
FAM78A-201ENST00000247295 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 CACNA2D4Q7Z3S7 1137 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 SYT1P21579 422 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 USP19O94966 1318 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
FAM78A-201ENST00000247295 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
FAM78A-201ENST00000247295 KIF5CO60282 957 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 A1BGP04217 495 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 ATP2C2O75185 946 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 CHMP4BP1P59074 171 aa13.01□□□□□ -0.33
FAM78A-201ENST00000247295 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
FAM78A-201ENST00000247295 ZNF594Q96JF6 807 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms