RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 SNAP23O00161 211 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 HIP1O00291 1037 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
NUP85-201ENST00000245544 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
NUP85-201ENST00000245544 NEK4P51957 841 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 SCARF1Q14162 830 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 PAG1Q9NWQ8 432 aa16.22■□□□□ 0.19
NUP85-201ENST00000245544 LAMB2P55268 1798 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 LRP5O75197 1615 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 ZPR1O75312 459 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 ANAPC15P60006 121 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 SEC62Q99442 399 aaKnown RBP16.21■□□□□ 0.19
NUP85-201ENST00000245544 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
NUP85-201ENST00000245544 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 MED23Q9ULK4 1368 aa16.21■□□□□ 0.19
NUP85-201ENST00000245544 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 PDE8BO95263 885 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 NFKBIBQ15653 356 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 CCDC152Q4G0S7 254 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 GORABQ5T7V8 394 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 IL17RAQ96F46 866 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 SPEF2Q9C093 1822 aa16.21■□□□□ 0.18
NUP85-201ENST00000245544 TAF1P21675 1872 aa16.2■□□□□ 0.18
NUP85-201ENST00000245544 ABCC12Q96J65 1359 aa16.2■□□□□ 0.18
NUP85-201ENST00000245544 DDIT3P35638 169 aa16.2■□□□□ 0.18
NUP85-201ENST00000245544 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
NUP85-201ENST00000245544 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
NUP85-201ENST00000245544 ST18O60284 1047 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 TAF5LO75529 589 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUP85-201ENST00000245544 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
NUP85-201ENST00000245544 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
NUP85-201ENST00000245544 CASZ1Q86V15 1759 aa16.18■□□□□ 0.18
NUP85-201ENST00000245544 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
NUP85-201ENST00000245544 MAP4K1Q92918 833 aa16.18■□□□□ 0.18
NUP85-201ENST00000245544 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
NUP85-201ENST00000245544 FGFR2P21802 821 aa16.18■□□□□ 0.18
NUP85-201ENST00000245544 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
NUP85-201ENST00000245544 RFC4P35249 363 aa16.18■□□□□ 0.18
NUP85-201ENST00000245544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP85-201ENST00000245544 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
NUP85-201ENST00000245544 RTL9Q8NET4 1388 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 RGL2O15211 777 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 ZAP70P43403 619 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
NUP85-201ENST00000245544 NECTIN1Q15223 517 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 PROM2Q8N271 834 aa16.17■□□□□ 0.18
NUP85-201ENST00000245544 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 CPA1P15085 419 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 MCAMP43121 646 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 COL9A3Q14050 684 aaPredicted RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 AKAP11Q9UKA4 1901 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 HSP90B1P14625 803 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 PUM3Q15397 648 aaKnown RBP16.16■□□□□ 0.18
NUP85-201ENST00000245544 SLC10A5Q5PT55 438 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 TAF6LQ9Y6J9 622 aa16.16■□□□□ 0.18
NUP85-201ENST00000245544 UBR3Q6ZT12 1888 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
NUP85-201ENST00000245544 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
NUP85-201ENST00000245544 PHKA1P46020 1223 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 CCDC102BQ68D86 513 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 KCNB2Q92953 911 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 MCMDC2Q4G0Z9 681 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 LPIN2Q92539 896 aa16.15■□□□□ 0.18
NUP85-201ENST00000245544 KCNJ4P48050 445 aa16.14■□□□□ 0.17
NUP85-201ENST00000245544 CHRNDQ07001 517 aa16.14■□□□□ 0.17
NUP85-201ENST00000245544 NFIXQ14938 502 aa16.14■□□□□ 0.17
NUP85-201ENST00000245544 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
NUP85-201ENST00000245544 SLC27A2O14975 620 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 ZMYM1Q5SVZ6 1142 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
NUP85-201ENST00000245544 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
NUP85-201ENST00000245544 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 TTC14Q96N46 770 aa16.13■□□□□ 0.17
NUP85-201ENST00000245544 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
NUP85-201ENST00000245544 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
NUP85-201ENST00000245544 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms