RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 OTUD7AQ8TE49 926 aaPredicted RBP20.69■□□□□ 0.9
CDKN1A-201ENST00000244741 NRXN2Q9P2S2 1712 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 EYA2O00167 538 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 HELBQ8NG08 1087 aaPredicted RBP20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 SNX21Q969T3 373 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 MPHOSPH8Q99549 860 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 ANKRD31Q8N7Z5 1873 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 CHRNA5P30532 468 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 CHMP5Q9NZZ3 219 aa20.68■□□□□ 0.9
CDKN1A-201ENST00000244741 CDC45O75419 566 aa20.67■□□□□ 0.9
CDKN1A-201ENST00000244741 POLD1P28340 1107 aa20.67■□□□□ 0.9
CDKN1A-201ENST00000244741 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
CDKN1A-201ENST00000244741 IGHMBP2P38935 993 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 CRY2Q49AN0 593 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 KIF1BPQ96EK5 621 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 CDC5LQ99459 802 aaKnown RBP20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 RAB11FIP3O75154 756 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
CDKN1A-201ENST00000244741 PDE6BP35913 854 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 SNAP23O00161 211 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 TAF5LO75529 589 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 RPS8P62241 208 aaKnown RBP20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 TSHZ3Q63HK5 1081 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 IL27Q8NEV9 243 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 RIPOR2Q9Y4F9 1068 aa20.65■□□□□ 0.9
CDKN1A-201ENST00000244741 RTL9Q8NET4 1388 aa20.64■□□□□ 0.9
CDKN1A-201ENST00000244741 SRGNP10124 158 aa20.64■□□□□ 0.89
CDKN1A-201ENST00000244741 IL15P40933 162 aaPredicted RBP20.64■□□□□ 0.89
CDKN1A-201ENST00000244741 METTL24Q5JXM2 366 aa20.64■□□□□ 0.89
CDKN1A-201ENST00000244741 KLRG2A4D1S0 409 aaPredicted RBP20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 WTIPA6NIX2 430 aaPredicted RBP20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 PTGER2P43116 358 aa20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 ERC1Q8IUD2 1116 aa20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
CDKN1A-201ENST00000244741 RIC1Q4ADV7 1423 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 CIAO1O76071 339 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 GRAPQ13588 217 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 AACSQ86V21 672 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 EAF2Q96CJ1 260 aaPredicted RBP20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 TLR7Q9NYK1 1049 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 H0YIN7 160 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 MCM4P33991 863 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 DDIT3P35638 169 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 TIMM10P62072 90 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 CEP126Q9P2H0 1117 aa20.62■□□□□ 0.89
CDKN1A-201ENST00000244741 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 CLASRPQ8N2M8 674 aaKnown RBP20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 CD2BP2O95400 341 aaKnown RBP20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 CHRNDQ07001 517 aa20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
CDKN1A-201ENST00000244741 NPR1P16066 1061 aa20.6■□□□□ 0.89
CDKN1A-201ENST00000244741 MINPP1Q9UNW1 487 aa20.6■□□□□ 0.89
CDKN1A-201ENST00000244741 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
CDKN1A-201ENST00000244741 TNNI3KQ59H18 835 aa20.59■□□□□ 0.89
CDKN1A-201ENST00000244741 MASTLQ96GX5 879 aa20.59■□□□□ 0.89
CDKN1A-201ENST00000244741 FPGT-TNNI3KV9GXZ4 949 aa20.59■□□□□ 0.89
CDKN1A-201ENST00000244741 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
CDKN1A-201ENST00000244741 IFIT2P09913 472 aaKnown RBP20.58■□□□□ 0.89
CDKN1A-201ENST00000244741 SDSP20132 328 aa20.58■□□□□ 0.89
CDKN1A-201ENST00000244741 SPON1Q9HCB6 807 aa20.58■□□□□ 0.89
CDKN1A-201ENST00000244741 DPEP1P16444 411 aa20.58■□□□□ 0.88
CDKN1A-201ENST00000244741 VGLL2Q8N8G2 317 aa20.58■□□□□ 0.88
CDKN1A-201ENST00000244741 FBXO3Q9UK99 471 aa20.58■□□□□ 0.88
CDKN1A-201ENST00000244741 SOCS7O14512 581 aa20.57■□□□□ 0.88
CDKN1A-201ENST00000244741 PDE8BO95263 885 aa20.57■□□□□ 0.88
CDKN1A-201ENST00000244741 CRAMP1Q96RY5 1269 aa20.57■□□□□ 0.88
CDKN1A-201ENST00000244741 MROH5Q6ZUA9 1318 aa20.57■□□□□ 0.88
CDKN1A-201ENST00000244741 LRP5O75197 1615 aa20.56■□□□□ 0.88
CDKN1A-201ENST00000244741 A0A1B0GUL7 405 aa20.56■□□□□ 0.88
CDKN1A-201ENST00000244741 ADORA1P30542 326 aa20.56■□□□□ 0.88
CDKN1A-201ENST00000244741 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
CDKN1A-201ENST00000244741 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
CDKN1A-201ENST00000244741 CACNA1SQ13698 1873 aa20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 PPEF1O14829 653 aaPredicted RBP20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 ANKIB1Q9P2G1 1089 aa20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 MX1P20591 662 aa20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 ATP2B3Q16720 1220 aa20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
CDKN1A-201ENST00000244741 BBOX1O75936 387 aa20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 KCNA3P22001 575 aa20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 ALDH1B1P30837 517 aa20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 PDE1AP54750 535 aa20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 USP26Q9BXU7 913 aa20.54■□□□□ 0.88
CDKN1A-201ENST00000244741 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms