RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 HPDP32754 393 aaPredicted RBP15.72■□□□□ 0.11
TARDBP-201ENST00000240185 SEPT14Q6ZU15 432 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 PLCB3Q01970 1234 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
TARDBP-201ENST00000240185 TSNAXIP1Q2TAA8 658 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 UBLCP1Q8WVY7 318 aaPredicted RBP15.72■□□□□ 0.11
TARDBP-201ENST00000240185 NKIRAS1Q9NYS0 192 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 TNNC1P63316 161 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 ARID5AQ03989 594 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 CCDC50Q8IVM0 306 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 HMG20BQ9P0W2 317 aa15.72■□□□□ 0.11
TARDBP-201ENST00000240185 RPGRIP1LQ68CZ1 1315 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 F6X3S4 739 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 DNM1Q05193 864 aaKnown RBP15.71■□□□□ 0.11
TARDBP-201ENST00000240185 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
TARDBP-201ENST00000240185 SMC1BQ8NDV3 1235 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 RBM28Q9NW13 759 aaKnown RBP15.71■□□□□ 0.11
TARDBP-201ENST00000240185 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 CAVIN4Q5BKX8 364 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 CEP85LQ5SZL2 805 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 BRF1Q92994 677 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 CDK19Q9BWU1 502 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
TARDBP-201ENST00000240185 TERF1P54274 439 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 TTC22Q5TAA0 569 aa15.71■□□□□ 0.11
TARDBP-201ENST00000240185 SYNCQ9H7C4 482 aa15.71■□□□□ 0.1
TARDBP-201ENST00000240185 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 TRIM27P14373 513 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 HAND2P61296 217 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 TAF7Q15545 349 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 PNMA8AQ86V59 439 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 IFNKQ9P0W0 207 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 GBP1P32455 592 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 STAT6P42226 847 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 CFAP157Q5JU67 520 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 RNF168Q8IYW5 571 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 F13A1P00488 732 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 GJC1P36383 396 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 CCDC38Q502W7 563 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 PDE1CQ14123 709 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-201ENST00000240185 MCM10Q7L590 875 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 VCXQ9H320 206 aa15.7■□□□□ 0.1
TARDBP-201ENST00000240185 IGHDP01880 384 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 CALCOCO2Q13137 446 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 GNAT3A8MTJ3 354 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 NCOA7Q8NI08 942 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
TARDBP-201ENST00000240185 BMP15O95972 392 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 ARHGAP25P42331 645 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 ERBINQ96RT1 1412 aa15.69■□□□□ 0.1
TARDBP-201ENST00000240185 GOLGA6CA6NDK9 693 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TMEM110-MUSTN1A8MSY1 372 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 GOLGA6DP0CG33 693 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 MARCKSP29966 332 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-201ENST00000240185 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.68■□□□□ 0.13e-13■□□□□ 8.3
TARDBP-201ENST00000240185 LRRC45Q96CN5 670 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 EHMT1Q9H9B1 1298 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 GOLGA6AQ9NYA3 693 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 RABEP2Q9H5N1 569 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 RRAGDQ9NQL2 400 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TSHZ3Q63HK5 1081 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TXNDC16Q9P2K2 825 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 A6NNZ2 444 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
TARDBP-201ENST00000240185 EEF2P13639 858 aaKnown RBP15.68■□□□□ 0.1
TARDBP-201ENST00000240185 FLIIQ13045 1269 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TUBB8Q3ZCM7 444 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 MYD88Q99836 296 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 VAT1LQ9HCJ6 419 aa15.68■□□□□ 0.1
TARDBP-201ENST00000240185 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 ATP2A2P16615 1042 aaKnown RBP15.67■□□□□ 0.1
TARDBP-201ENST00000240185 ERCC3P19447 782 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
TARDBP-201ENST00000240185 FMNL3Q8IVF7 1028 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 MRVI1Q9Y6F6 885 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 GCKP35557 465 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 CABS1Q96KC9 395 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 PTPRGP23470 1445 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 UBXN1Q04323 297 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 KIAA1524Q8TCG1 905 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
TARDBP-201ENST00000240185 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
TARDBP-201ENST00000240185 CCDC122Q5T0U0 273 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 MICAL1Q8TDZ2 1067 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 GMNNO75496 209 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 WHAMMP3Q1A5X7 153 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 ARHGEF2Q92974 986 aaKnown RBP15.66■□□□□ 0.1
TARDBP-201ENST00000240185 ASIC1P78348 528 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 BANK1Q8NDB2 785 aa15.66■□□□□ 0.1
TARDBP-201ENST00000240185 SNX21Q969T3 373 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms