RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 TNRC6CQ9HCJ0 1690 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 PXDNLA1KZ92 1463 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 U2SURPO15042 1029 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 CYP19A1P11511 503 aaPredicted RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 EZH2Q15910 746 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 TXNRD1Q16881 649 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 EGFLAMQ63HQ2 1017 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 ZNF790Q6PG37 636 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 SMARCC1Q92922 1105 aaPredicted RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 GPCPD1Q9NPB8 672 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 LTBP1Q14766 1721 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 PNPLA7Q6ZV29 1317 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 LMOD3Q0VAK6 560 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 SF3A1Q15459 793 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 MCM10Q7L590 875 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 NFATC2IPQ8NCF5 419 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 DDX54Q8TDD1 881 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 RNF166Q96A37 237 aaPredicted RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 MAP7D2Q96T17 732 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 MRS2Q9HD23 443 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 FAM217BQ9NTX9 383 aaPredicted RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 ZMIZ1Q9ULJ6 1067 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 ATP10DQ9P241 1426 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 LOC102724428A0A0B4J2F2 783 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 KCNQ3O43525 872 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 KIF20AO95235 890 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 CLK2P49760 499 aaKnown RBP4.51□□□□□ -1.69
UFM1-201ENST00000239878 SIK1P57059 783 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 IRX5P78411 483 aaPredicted RBP4.51□□□□□ -1.69
UFM1-201ENST00000239878 C1orf141Q5JVX7 400 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 ALG2Q9H553 416 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 TMOD3Q9NYL9 352 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 LIMD1Q9UGP4 676 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 C10orf71Q711Q0 1435 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 A0A1B0GUL6 1792 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 NUP98P52948 1817 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 TPD52L2O43399 206 aaKnown RBP4.51□□□□□ -1.69
UFM1-201ENST00000239878 TAF7Q15545 349 aaPredicted RBP4.51□□□□□ -1.69
UFM1-201ENST00000239878 DEFB132Q7Z7B7 95 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 CCDC146Q8IYE0 955 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 MARVELD3Q96A59 401 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
UFM1-201ENST00000239878 GPHNQ9NQX3 736 aaPredicted RBP4.51□□□□□ -1.69
UFM1-201ENST00000239878 SNED1Q8TER0 1413 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 SOWAHDA6NJG2 315 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 APAF1O14727 1248 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 GIGYF1O75420 1035 aaPredicted RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 EN1Q05925 392 aaPredicted RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 RAD51AP2Q09MP3 1159 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
UFM1-201ENST00000239878 GRIPAP1Q4V328 841 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 EP400NLQ6ZTU2 488 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 KIF12Q96FN5 646 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 SGSM3Q96HU1 749 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 ZNF496Q96IT1 587 aaPredicted RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 MBIPQ9NS73 344 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 CGNQ9P2M7 1197 aaKnown RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 ZNF646O15015 1829 aaPredicted RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 APBA3O96018 575 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 APPP05067 770 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 PTGER2P43116 358 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 BAG6P46379 1132 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 EMP3P54852 163 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 NOP9Q86U38 636 aaKnown RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 NLGN1Q8N2Q7 840 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 THUMPD2Q9BTF0 503 aaKnown RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 RBM27Q9P2N5 1060 aaKnown RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 ZBED9Q6R2W3 1325 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 FSD2A1L4K1 749 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 NBPF26B4DH59 902 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 CLGNO14967 610 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 SSFA2P28290 1259 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 CABP4P57796 275 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 SLFN5Q08AF3 891 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 NBPF14Q5TI25 921 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 NBPF10Q6P3W6 841 aaKnown RBP4.5□□□□□ -1.69
UFM1-201ENST00000239878 NBPF15Q8N660 670 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 KLHL42Q9P2K6 505 aa4.5□□□□□ -1.69
UFM1-201ENST00000239878 COL4A1P02462 1669 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 LETM1O95202 739 aaPredicted RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 EIF5P55010 431 aaKnown RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 ELOAQ14241 798 aaKnown RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 SLC15A2Q16348 729 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 EVI5LQ96CN4 794 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 BCL2L12Q9HB09 334 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 MAPK8IP3Q9UPT6 1336 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 ARFGEF1Q9Y6D6 1849 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 TLDC2A0PJX2 215 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 PRAMEF22A3QJZ6 481 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 MCCD1P59942 119 aaPredicted RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 MDM2Q00987 491 aaPredicted RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 DUSP27Q5VZP5 1158 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 HS3ST6Q96QI5 342 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 GTPBP4Q9BZE4 634 aaKnown RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 USP42Q9H9J4 1324 aaKnown RBP4.49□□□□□ -1.69
UFM1-201ENST00000239878 COL15A1P39059 1388 aa4.49□□□□□ -1.69
UFM1-201ENST00000239878 GOLGA6L3A6NEY3 463 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms