RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.37
CCDC170-201ENST00000239374 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
CCDC170-201ENST00000239374 CLSTN1O94985 981 aa12.71□□□□□ -0.38
CCDC170-201ENST00000239374 TUBB4AP04350 444 aa12.71□□□□□ -0.38
CCDC170-201ENST00000239374 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.38
CCDC170-201ENST00000239374 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 UTP14CQ5TAP6 766 aaKnown RBP12.7□□□□□ -0.38
CCDC170-201ENST00000239374 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC170-201ENST00000239374 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
CCDC170-201ENST00000239374 LARGE1O95461 756 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 EVCP57679 992 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 CCDC181Q5TID7 509 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 TFCP2Q12800 502 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 ERCC6LQ2NKX8 1250 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 CACTINQ8WUQ7 758 aaKnown RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
CCDC170-201ENST00000239374 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 UNC13BO14795 1591 aa12.69□□□□□ -0.38
CCDC170-201ENST00000239374 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
CCDC170-201ENST00000239374 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
CCDC170-201ENST00000239374 STIM1Q13586 685 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 CLTCL1P53675 1640 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 CARD6Q9BX69 1037 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 KIAA0754O94854 1291 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 NAPBQ9H115 298 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 SSRP1Q08945 709 aaKnown RBP12.68□□□□□ -0.38
CCDC170-201ENST00000239374 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
CCDC170-201ENST00000239374 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 SLC26A6Q9BXS9 759 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 PAG1Q9NWQ8 432 aa12.68□□□□□ -0.38
CCDC170-201ENST00000239374 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 PRC1O43663 620 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 CCDC191Q8NCU4 936 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 HOXC9P31274 260 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 RDXP35241 583 aaKnown RBP12.67□□□□□ -0.38
CCDC170-201ENST00000239374 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-201ENST00000239374 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 LZTFL1Q9NQ48 299 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 LAMC1P11047 1609 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 MAP9Q49MG5 647 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
CCDC170-201ENST00000239374 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
CCDC170-201ENST00000239374 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
CCDC170-201ENST00000239374 CAPN2P17655 700 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 FANCCQ00597 558 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 MYL5Q02045 173 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 PUF60Q9UHX1 559 aaKnown RBP12.66□□□□□ -0.38
CCDC170-201ENST00000239374 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 AMOTL1Q8IY63 956 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
CCDC170-201ENST00000239374 CENPHQ9H3R5 247 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 PHACTR2O75167 634 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 ATF3P18847 181 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
CCDC170-201ENST00000239374 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
CCDC170-201ENST00000239374 A0A087WWV3 80 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 CCDC175P0C221 793 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 C10orf67Q8IYJ2 551 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
CCDC170-201ENST00000239374 IQCEQ6IPM2 695 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 IMPACTQ9P2X3 320 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 E9PCH4 1651 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 UHRF1BP1LA0JNW5 1464 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 CDR1P51861 262 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 IFIT5Q13325 482 aaKnown RBP12.65□□□□□ -0.38
CCDC170-201ENST00000239374 VPS18Q9P253 973 aa12.65□□□□□ -0.38
CCDC170-201ENST00000239374 RSPH14Q9UHP6 348 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms