RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 GOLIM4O00461 696 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 PHF14O94880 888 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 UBE2HP62256 183 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 CSPP1Q1MSJ5 1256 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
UBE3D-201ENST00000237186 CNPY2Q9Y2B0 182 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 AKAP2Q9Y2D5 859 aa19.26■□□□□ 0.67
UBE3D-201ENST00000237186 CYP21A2P08686 494 aa19.25■□□□□ 0.67
UBE3D-201ENST00000237186 PDLIM2Q96JY6 352 aa19.25■□□□□ 0.67
UBE3D-201ENST00000237186 CDHR2Q9BYE9 1310 aa19.25■□□□□ 0.67
UBE3D-201ENST00000237186 BCL9O00512 1426 aa19.25■□□□□ 0.67
UBE3D-201ENST00000237186 ESPNB1AK53 854 aa19.24■□□□□ 0.67
UBE3D-201ENST00000237186 CHGBP05060 677 aa19.24■□□□□ 0.67
UBE3D-201ENST00000237186 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
UBE3D-201ENST00000237186 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
UBE3D-201ENST00000237186 HSP90AB3PQ58FF7 597 aa19.24■□□□□ 0.67
UBE3D-201ENST00000237186 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
UBE3D-201ENST00000237186 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
UBE3D-201ENST00000237186 HMGB1P09429 215 aaKnown RBP19.24■□□□□ 0.67
UBE3D-201ENST00000237186 LARP1BQ659C4 914 aaKnown RBP19.24■□□□□ 0.67
UBE3D-201ENST00000237186 LETM1O95202 739 aaPredicted RBP19.23■□□□□ 0.67
UBE3D-201ENST00000237186 HS1BP3Q53T59 392 aa19.23■□□□□ 0.67
UBE3D-201ENST00000237186 RNF113AO15541 343 aaKnown RBP19.22■□□□□ 0.67
UBE3D-201ENST00000237186 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
UBE3D-201ENST00000237186 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 LRP6O75581 1613 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
UBE3D-201ENST00000237186 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 NLRP10Q86W26 655 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 SLC4A9Q96Q91 983 aa19.22■□□□□ 0.67
UBE3D-201ENST00000237186 ABCC12Q96J65 1359 aa19.21■□□□□ 0.67
UBE3D-201ENST00000237186 ADAMTS2O95450 1211 aa19.21■□□□□ 0.67
UBE3D-201ENST00000237186 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
UBE3D-201ENST00000237186 CCDC183Q5T5S1 534 aa19.21■□□□□ 0.67
UBE3D-201ENST00000237186 GTF3C6Q969F1 213 aa19.21■□□□□ 0.67
UBE3D-201ENST00000237186 TSPY26PQ9H489 355 aa19.21■□□□□ 0.67
UBE3D-201ENST00000237186 EXOC5O00471 708 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 DNM1Q05193 864 aaKnown RBP19.2■□□□□ 0.66
UBE3D-201ENST00000237186 AGXT2Q9BYV1 514 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 SPEF2Q9C093 1822 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 ERVV-1B6SEH8 477 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 HSPD1P10809 573 aaKnown RBP19.2■□□□□ 0.66
UBE3D-201ENST00000237186 DHX32Q7L7V1 743 aaKnown RBP19.2■□□□□ 0.66
UBE3D-201ENST00000237186 XAGE2Q96GT9 111 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
UBE3D-201ENST00000237186 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
UBE3D-201ENST00000237186 VPS37CA5D8V6 355 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-201ENST00000237186 UBAP1LF5GYI3 381 aa19.19■□□□□ 0.66
UBE3D-201ENST00000237186 ZFYP08048 801 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-201ENST00000237186 EXOSC10Q01780 885 aaKnown RBP19.19■□□□□ 0.66
UBE3D-201ENST00000237186 HLFQ16534 295 aa19.19■□□□□ 0.66
UBE3D-201ENST00000237186 Q6ZUG5 572 aa19.19■□□□□ 0.66
UBE3D-201ENST00000237186 STOX1Q6ZVD7 989 aa19.19■□□□□ 0.66
UBE3D-201ENST00000237186 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
UBE3D-201ENST00000237186 MAST3O60307 1309 aa19.19■□□□□ 0.66
UBE3D-201ENST00000237186 FAM184AQ8NB25 1140 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 TTLL11Q8NHH1 800 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 ELP1O95163 1332 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 FIBPO43427 364 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 IL6STP40189 918 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 FBXL16Q8N461 479 aa19.18■□□□□ 0.66
UBE3D-201ENST00000237186 ZNF512BQ96KM6 892 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
UBE3D-201ENST00000237186 KRT85P78386 507 aa19.17■□□□□ 0.66
UBE3D-201ENST00000237186 CDC37L1Q7L3B6 337 aa19.17■□□□□ 0.66
UBE3D-201ENST00000237186 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
UBE3D-201ENST00000237186 PFKFB2O60825 505 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 ADORA1P30542 326 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 GORABQ5T7V8 394 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 SMARCC2Q8TAQ2 1214 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 UVSSAQ2YD98 709 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 OSBP2Q969R2 916 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
UBE3D-201ENST00000237186 CTSWP56202 376 aa19.15■□□□□ 0.66
UBE3D-201ENST00000237186 E7EWF7 191 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 M0R2C6 588 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 DTNBO60941 627 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 ITGA6P23229 1130 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.65
UBE3D-201ENST00000237186 STK3Q13188 491 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 LDHAL6AQ6ZMR3 332 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 BRF1Q92994 677 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 AK7Q96M32 723 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 RIC1Q4ADV7 1423 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 ANKRD18BA2A2Z9 1011 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 IRS4O14654 1257 aaPredicted RBP19.14■□□□□ 0.65
UBE3D-201ENST00000237186 GPTP24298 496 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 ATP2B3Q16720 1220 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 ZNF34Q8IZ26 560 aa19.14■□□□□ 0.65
UBE3D-201ENST00000237186 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms