RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ADCY2Q08462 1091 aa15.04■□□□□ -0
MSH2-201ENST00000233146 NBPF3Q9H094 633 aa15.04■□□□□ -0
MSH2-201ENST00000233146 IL25Q9H293 177 aa15.04■□□□□ -0
MSH2-201ENST00000233146 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
MSH2-201ENST00000233146 CHUKO15111 745 aa15.04■□□□□ -0
MSH2-201ENST00000233146 CDC37L1Q7L3B6 337 aa15.04■□□□□ -0
MSH2-201ENST00000233146 FERMT3Q86UX7 667 aa15.04■□□□□ -0
MSH2-201ENST00000233146 ANKZF1Q9H8Y5 726 aa15.04■□□□□ -0
MSH2-201ENST00000233146 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
MSH2-201ENST00000233146 KIAA0232Q92628 1395 aa15.03■□□□□ -0
MSH2-201ENST00000233146 VWA3AA6NCI4 1184 aa15.03■□□□□ -0
MSH2-201ENST00000233146 TMCO5BA8MYB1 307 aa15.03■□□□□ -0
MSH2-201ENST00000233146 NF2P35240 595 aa15.03■□□□□ -0
MSH2-201ENST00000233146 TSHZ3Q63HK5 1081 aa15.03■□□□□ -0
MSH2-201ENST00000233146 BICD2Q8TD16 824 aa15.03■□□□□ -0
MSH2-201ENST00000233146 FAM210AQ96ND0 272 aa15.03■□□□□ -0
MSH2-201ENST00000233146 TFIP11Q9UBB9 837 aaKnown RBP15.03■□□□□ -0
MSH2-201ENST00000233146 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
MSH2-201ENST00000233146 CTAGE5O15320 804 aa15.03■□□□□ -0
MSH2-201ENST00000233146 ST3GAL1Q11201 340 aa15.03■□□□□ -0
MSH2-201ENST00000233146 LARP1BQ659C4 914 aaKnown RBP15.03■□□□□ -0
MSH2-201ENST00000233146 XAGE2Q96GT9 111 aa15.03■□□□□ -0
MSH2-201ENST00000233146 ETAA1Q9NY74 926 aa15.03■□□□□ -0
MSH2-201ENST00000233146 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
MSH2-201ENST00000233146 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
MSH2-201ENST00000233146 PHACTR2O75167 634 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ERLIN1O75477 346 aa15.02■□□□□ -0
MSH2-201ENST00000233146 INPP5BP32019 993 aa15.02■□□□□ -0
MSH2-201ENST00000233146 WLSQ5T9L3 541 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ISM2Q6H9L7 571 aa15.02■□□□□ -0
MSH2-201ENST00000233146 OTUD6BQ8N6M0 293 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ZNF483Q8TF39 744 aaPredicted RBP15.02■□□□□ -0
MSH2-201ENST00000233146 CCDC102AQ96A19 550 aa15.02■□□□□ -0
MSH2-201ENST00000233146 XPO4Q9C0E2 1151 aaKnown RBP15.02■□□□□ -0
MSH2-201ENST00000233146 FNTAP49354 379 aa15.02■□□□□ -0
MSH2-201ENST00000233146 AOPEPQ8N6M6 819 aa15.02■□□□□ -0
MSH2-201ENST00000233146 MSANTD4Q8NCY6 345 aa15.02■□□□□ -0
MSH2-201ENST00000233146 RILPL2Q969X0 211 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ZSCAN31Q96LW9 406 aaPredicted RBP15.02■□□□□ -0
MSH2-201ENST00000233146 WDR24Q96S15 920 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ACBD3Q9H3P7 528 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ABCB6Q9NP58 842 aa15.02■□□□□ -0
MSH2-201ENST00000233146 SH2B1Q9NRF2 756 aaPredicted RBP15.02■□□□□ -0
MSH2-201ENST00000233146 ANO10Q9NW15 660 aa15.02■□□□□ -0
MSH2-201ENST00000233146 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
MSH2-201ENST00000233146 POTEB2H3BUK9 544 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 EBAG9O00559 213 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 SHOX2O60902 331 aaPredicted RBP15.02□□□□□ -0.01
MSH2-201ENST00000233146 CLSTN1O94985 981 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 CASP8Q14790 479 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 FCHSD1Q86WN1 690 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 RASEFQ8IZ41 740 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 AFAP1L1Q8TED9 768 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 SUGCTQ9HAC7 445 aa15.02□□□□□ -0.01
MSH2-201ENST00000233146 RDXP35241 583 aaKnown RBP15.01□□□□□ -0.01
MSH2-201ENST00000233146 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
MSH2-201ENST00000233146 ADCY9O60503 1353 aa15.01□□□□□ -0.01
MSH2-201ENST00000233146 NSD2O96028 1365 aa15.01□□□□□ -0.01
MSH2-201ENST00000233146 CCNHP51946 323 aaPredicted RBP15.01□□□□□ -0.01
MSH2-201ENST00000233146 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
MSH2-201ENST00000233146 CD248Q9HCU0 757 aa15.01□□□□□ -0.01
MSH2-201ENST00000233146 ZSCAN12O43309 604 aa15□□□□□ -0.01
MSH2-201ENST00000233146 CCT5P48643 541 aa15□□□□□ -0.01
MSH2-201ENST00000233146 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
MSH2-201ENST00000233146 PRPF6O94906 941 aaKnown RBP15□□□□□ -0.01
MSH2-201ENST00000233146 KCNB2Q92953 911 aa15□□□□□ -0.01
MSH2-201ENST00000233146 PNKPQ96T60 521 aa15□□□□□ -0.01
MSH2-201ENST00000233146 AMOTL1Q8IY63 956 aa15□□□□□ -0.01
MSH2-201ENST00000233146 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
MSH2-201ENST00000233146 IFNKQ9P0W0 207 aa15□□□□□ -0.01
MSH2-201ENST00000233146 ELL2O00472 640 aaPredicted RBP14.99□□□□□ -0.01
MSH2-201ENST00000233146 RNF40O75150 1001 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 SKIDA1Q1XH10 827 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 AP1ARQ63HQ0 302 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 GNG11P61952 73 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 KRT24Q2M2I5 525 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 DHX58Q96C10 678 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 NRXN1Q9ULB1 1477 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 SOS1Q07889 1333 aaPredicted RBP14.99□□□□□ -0.01
MSH2-201ENST00000233146 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 GLI2P10070 1586 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 CHMP4BP1P59074 171 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 UNC5CLQ8IV45 518 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 CAPN7Q9Y6W3 813 aa14.99□□□□□ -0.01
MSH2-201ENST00000233146 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
MSH2-201ENST00000233146 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 GIGYF1O75420 1035 aaPredicted RBP14.98□□□□□ -0.01
MSH2-201ENST00000233146 PDCP20941 246 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 AARSP49588 968 aaKnown RBP eCLIP14.98□□□□□ -0.01
MSH2-201ENST00000233146 TWISTNBQ3B726 338 aaPredicted RBP14.98□□□□□ -0.01
MSH2-201ENST00000233146 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 CDC42BPBQ9Y5S2 1711 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 A0A087WWV3 80 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 HMMRO75330 724 aa14.98□□□□□ -0.01
MSH2-201ENST00000233146 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
MSH2-201ENST00000233146 SYF2O95926 243 aaKnown RBP14.98□□□□□ -0.01
MSH2-201ENST00000233146 CPA1P15085 419 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms