RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 CCZ1P86791 482 aaPredicted RBP16.75■□□□□ 0.27
SFXN3-201ENST00000224807 IQCB1Q15051 598 aa16.75■□□□□ 0.27
SFXN3-201ENST00000224807 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
SFXN3-201ENST00000224807 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
SFXN3-201ENST00000224807 BICC1Q9H694 974 aaKnown RBP16.75■□□□□ 0.27
SFXN3-201ENST00000224807 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
SFXN3-201ENST00000224807 NALCNQ8IZF0 1738 aa16.75■□□□□ 0.27
SFXN3-201ENST00000224807 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 C10orf67Q8IYJ2 551 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 TECPR2O15040 1411 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 ST5P78524 1137 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 SCRN1Q12765 414 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 TMCO3Q6UWJ1 677 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 LRRC59Q96AG4 307 aaKnown RBP16.74■□□□□ 0.27
SFXN3-201ENST00000224807 SIRT1Q96EB6 747 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
SFXN3-201ENST00000224807 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
SFXN3-201ENST00000224807 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 STK38Q15208 465 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 SERPINC1P01008 464 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 POLA2Q14181 598 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 SUCLG2Q96I99 432 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 USP6P35125 1406 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 SASH1O94885 1247 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
SFXN3-201ENST00000224807 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
SFXN3-201ENST00000224807 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
SFXN3-201ENST00000224807 KDRP35968 1356 aa16.72■□□□□ 0.27
SFXN3-201ENST00000224807 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
SFXN3-201ENST00000224807 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
SFXN3-201ENST00000224807 RESTQ13127 1097 aa16.72■□□□□ 0.27
SFXN3-201ENST00000224807 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
SFXN3-201ENST00000224807 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
SFXN3-201ENST00000224807 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
SFXN3-201ENST00000224807 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
SFXN3-201ENST00000224807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
SFXN3-201ENST00000224807 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
SFXN3-201ENST00000224807 NRDCO43847 1150 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.26
SFXN3-201ENST00000224807 CAPN2P17655 700 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 LMAN1P49257 510 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 NDUFA8P51970 172 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 SLC39A6Q13433 755 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 TAF3Q5VWG9 929 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 CALCOCO1Q9P1Z2 691 aa16.71■□□□□ 0.26
SFXN3-201ENST00000224807 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 PHACTR2O75167 634 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 RXRAP19793 462 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 KARSQ15046 597 aaKnown RBP16.7■□□□□ 0.26
SFXN3-201ENST00000224807 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
SFXN3-201ENST00000224807 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
SFXN3-201ENST00000224807 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
SFXN3-201ENST00000224807 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
SFXN3-201ENST00000224807 ELP1O95163 1332 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
SFXN3-201ENST00000224807 CYP21A2P08686 494 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 TM6SF1Q9BZW5 370 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 TRIM66O15016 1216 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.69■□□□□ 0.26
SFXN3-201ENST00000224807 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
SFXN3-201ENST00000224807 MCM6Q14566 821 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 SNRKQ9NRH2 765 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 FLT4P35916 1363 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 EVCP57679 992 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 GNG11P61952 73 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 NAT10Q9H0A0 1025 aaKnown RBP16.68■□□□□ 0.26
SFXN3-201ENST00000224807 CACNA1FO60840 1977 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.68■□□□□ 0.26
SFXN3-201ENST00000224807 GOLIM4O00461 696 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 MRFAP1L1Q96HT8 127 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 PCDHA7Q9UN72 937 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
SFXN3-201ENST00000224807 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
SFXN3-201ENST00000224807 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 TAF5LO75529 589 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 ERBB3P21860 1342 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
SFXN3-201ENST00000224807 PLA2G4AP47712 749 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms