RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ZGPATQ8N5A5 531 aaKnown RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 NEDD9Q14511 834 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 TMEM110-MUSTN1A8MSY1 372 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 ZNF75DP51815 510 aa12.55□□□□□ -0.4
USP31-201ENST00000219689 BAG1Q99933 345 aaPredicted RBP12.55□□□□□ -0.4
USP31-201ENST00000219689 PPANQ9NQ55 473 aaKnown RBP12.54□□□□□ -0.4
USP31-201ENST00000219689 CCT5P48643 541 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 ZNF445P59923 1031 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
USP31-201ENST00000219689 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
USP31-201ENST00000219689 AKR1B10O60218 316 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 RANBP1P43487 201 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 TUBBP07437 444 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
USP31-201ENST00000219689 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 NACAP1Q9BZK3 213 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 SSH1Q8WYL5 1049 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 NUCB1Q02818 461 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 TOP2AP11388 1531 aaKnown RBP12.53□□□□□ -0.4
USP31-201ENST00000219689 VPS41P49754 854 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 GNGT1P63211 74 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
USP31-201ENST00000219689 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 AFMP43652 599 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 MYH15Q9Y2K3 1946 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 F13A1P00488 732 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 ARID5AQ03989 594 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 CCDC102BQ68D86 513 aa12.53□□□□□ -0.4
USP31-201ENST00000219689 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.4
USP31-201ENST00000219689 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.4
USP31-201ENST00000219689 CTNNA3Q9UI47 895 aa12.52□□□□□ -0.4
USP31-201ENST00000219689 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.4
USP31-201ENST00000219689 CCDC63Q8NA47 563 aa12.52□□□□□ -0.4
USP31-201ENST00000219689 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.4
USP31-201ENST00000219689 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP31-201ENST00000219689 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 RUFY3Q7L099 469 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 KRT86O43790 486 aa12.52□□□□□ -0.41
USP31-201ENST00000219689 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 DDX12PQ92771 950 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 XAB2Q9HCS7 855 aaKnown RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 DHX29Q7Z478 1369 aaKnown RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 FAF1Q9UNN5 650 aaPredicted RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
USP31-201ENST00000219689 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 PRR16Q569H4 304 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP31-201ENST00000219689 TRIM47Q96LD4 638 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 PRC1O43663 620 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 BOLA2Q9H3K6 86 aa12.51□□□□□ -0.41
USP31-201ENST00000219689 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 SMARCC2Q8TAQ2 1214 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
USP31-201ENST00000219689 A6NNZ2 444 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 UBXN1Q04323 297 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 TUBB8Q3ZCM7 444 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 CCDC40Q4G0X9 1142 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
USP31-201ENST00000219689 PPP1R9BQ96SB3 815 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
USP31-201ENST00000219689 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 MAP3K1Q13233 1512 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms