RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
CCDC113-201ENST00000219299 EYA3Q99504 573 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
CCDC113-201ENST00000219299 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 CCAR2Q8N163 923 aaKnown RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 ARGLU1Q9NWB6 273 aaPredicted RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 CCDC173Q0VFZ6 552 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 PUM3Q15397 648 aaKnown RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 ZNF287Q9HBT7 754 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 TXNRD1Q16881 649 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
CCDC113-201ENST00000219299 GGA1Q9UJY5 639 aa11.07□□□□□ -0.64
CCDC113-201ENST00000219299 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 SERPINB2P05120 415 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 HLFQ16534 295 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 HIBADHP31937 336 aaKnown RBP11.06□□□□□ -0.64
CCDC113-201ENST00000219299 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
CCDC113-201ENST00000219299 SMIM5Q71RC9 77 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 NLRP10Q86W26 655 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 ZGPATQ8N5A5 531 aaKnown RBP11.06□□□□□ -0.64
CCDC113-201ENST00000219299 GREM2Q9H772 168 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
CCDC113-201ENST00000219299 CPDO75976 1380 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 LRRC7Q96NW7 1537 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 SSH3Q8TE77 659 aa11.06□□□□□ -0.64
CCDC113-201ENST00000219299 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 PDCP20941 246 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
CCDC113-201ENST00000219299 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 TCEAL9Q9UHQ7 104 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 CYP19A1P11511 503 aaPredicted RBP11.05□□□□□ -0.64
CCDC113-201ENST00000219299 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
CCDC113-201ENST00000219299 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
CCDC113-201ENST00000219299 IQCA1Q86XH1 822 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 CD163L1Q9NR16 1453 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 PDE6BP35913 854 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 BICD2Q8TD16 824 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 LPIN2Q92539 896 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 CRNKL1Q9BZJ0 848 aaKnown RBP11.05□□□□□ -0.64
CCDC113-201ENST00000219299 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
CCDC113-201ENST00000219299 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 BCS1LQ9Y276 419 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 MMP10P09238 476 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 LDHBP07195 334 aaKnown RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 TPM1P09493 284 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 GSTO1P78417 241 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 C2CD5Q86YS7 1000 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 RNF41Q9H4P4 317 aaPredicted RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
CCDC113-201ENST00000219299 MYO1BO43795 1136 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
CCDC113-201ENST00000219299 PICALMQ13492 652 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 PODXL2Q9NZ53 605 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 NMIQ13287 307 aaPredicted RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 HOMER1Q86YM7 354 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 CREBRFQ8IUR6 639 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 MPNDQ8N594 471 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 SEC31BQ9NQW1 1179 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 EAF2Q96CJ1 260 aaPredicted RBP11.03□□□□□ -0.64
CCDC113-201ENST00000219299 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
CCDC113-201ENST00000219299 TSPY2A6NKD2 308 aa11.02□□□□□ -0.64
CCDC113-201ENST00000219299 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.64
CCDC113-201ENST00000219299 ARHGEF1Q92888 912 aaKnown RBP11.02□□□□□ -0.64
CCDC113-201ENST00000219299 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.64
CCDC113-201ENST00000219299 VEZTQ9HBM0 779 aa11.02□□□□□ -0.65
CCDC113-201ENST00000219299 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms