RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FMN2Q9NZ56 1722 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 ME1P48163 572 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 KRT32Q14532 448 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 ERCC6LQ2NKX8 1250 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 USHBP1Q8N6Y0 703 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 SIL1Q9H173 461 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 ST7Q9NRC1 585 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
TUBB1-201ENST00000217133 KDRP35968 1356 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 CCZ1BP86790 482 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
TUBB1-201ENST00000217133 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 SLFNL1Q499Z3 407 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 SYT10Q6XYQ8 523 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 SYTL4Q96C24 671 aaPredicted RBP11.31□□□□□ -0.6
TUBB1-201ENST00000217133 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
TUBB1-201ENST00000217133 FSIP1Q8NA03 581 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 TEFQ10587 303 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 Q6ZUG5 572 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 ERCC4Q92889 916 aaPredicted RBP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
TUBB1-201ENST00000217133 TPM4P67936 248 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 TMC6Q7Z403 805 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 TRERF1Q96PN7 1200 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 MAP3K2Q9Y2U5 619 aa11.3□□□□□ -0.6
TUBB1-201ENST00000217133 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
TUBB1-201ENST00000217133 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 TEX35Q5T0J7 233 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
TUBB1-201ENST00000217133 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
TUBB1-201ENST00000217133 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 UBXN4Q92575 508 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
TUBB1-201ENST00000217133 MTX1Q13505 466 aa11.29□□□□□ -0.6
TUBB1-201ENST00000217133 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 GUCY1B3Q02153 619 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 CCDC150Q8NCX0 1101 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 TOPAZ1Q8N9V7 1692 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 ITSN1Q15811 1721 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 POLR3GO15318 223 aaPredicted RBP11.28□□□□□ -0.6
TUBB1-201ENST00000217133 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 USP28Q96RU2 1077 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 RCOR1Q9UKL0 485 aa11.28□□□□□ -0.6
TUBB1-201ENST00000217133 HOXC9P31274 260 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 FAM193AP78312 1265 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 EDC3Q96F86 508 aaKnown RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 KCNQ3O43525 872 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 TAF5LO75529 589 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 SASH1O94885 1247 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 CLCN6P51797 869 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 ZNF446Q9NWS9 450 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 IMPACTQ9P2X3 320 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 DNAI1Q9UI46 699 aa11.27□□□□□ -0.61
TUBB1-201ENST00000217133 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 XIRP1Q702N8 1843 aaKnown RBP11.27□□□□□ -0.61
TUBB1-201ENST00000217133 BTBD11A6QL63 1104 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 DCCP43146 1447 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 TOM1O60784 492 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 E4F1Q66K89 784 aaPredicted RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 BIN1O00499 593 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 HOXB7P09629 217 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms