RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 H3BQV1 296 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 HSP90B1P14625 803 aaKnown RBP15.7■□□□□ 0.1
SRP54-201ENST00000216774 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
SRP54-201ENST00000216774 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
SRP54-201ENST00000216774 BICD2Q8TD16 824 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 PGBD1Q96JS3 809 aa15.7■□□□□ 0.1
SRP54-201ENST00000216774 PFKFB2O60825 505 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 NAA16Q6N069 864 aaPredicted RBP15.69■□□□□ 0.1
SRP54-201ENST00000216774 SPC24Q8NBT2 197 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 HELLSQ9NRZ9 838 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 PYCARDQ9ULZ3 195 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 LAMB4A4D0S4 1761 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 NR1I2O75469 434 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 CCDC129Q6ZRS4 1044 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 GPR108Q9NPR9 543 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 KIF3AQ9Y496 699 aa15.69■□□□□ 0.1
SRP54-201ENST00000216774 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 CHAF1AQ13111 956 aaPredicted RBP15.68■□□□□ 0.1
SRP54-201ENST00000216774 DHX32Q7L7V1 743 aaKnown RBP15.68■□□□□ 0.1
SRP54-201ENST00000216774 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
SRP54-201ENST00000216774 DSCC1Q9BVC3 393 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 COL18A1P39060 1754 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 SCRN1Q12765 414 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
SRP54-201ENST00000216774 PLA2G4DQ86XP0 818 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 JARID2Q92833 1246 aaPredicted RBP15.68■□□□□ 0.1
SRP54-201ENST00000216774 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
SRP54-201ENST00000216774 GLI3P10071 1580 aa15.67■□□□□ 0.1
SRP54-201ENST00000216774 FGD1P98174 961 aa15.67■□□□□ 0.1
SRP54-201ENST00000216774 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
SRP54-201ENST00000216774 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
SRP54-201ENST00000216774 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
SRP54-201ENST00000216774 AGXT2Q9BYV1 514 aa15.67■□□□□ 0.1
SRP54-201ENST00000216774 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 H7C1W4 665 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 CTAGE5O15320 804 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 CYP27B1O15528 508 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 PTCD1O75127 700 aaKnown RBP15.66■□□□□ 0.1
SRP54-201ENST00000216774 PTGS1P23219 599 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 ZNF165P49910 485 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 ZNF75DP51815 510 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 FOXO4P98177 505 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 CHMP4CQ96CF2 233 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 PAG1Q9NWQ8 432 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 PARP4Q9UKK3 1724 aaKnown RBP15.66■□□□□ 0.1
SRP54-201ENST00000216774 STOX1Q6ZVD7 989 aa15.66■□□□□ 0.1
SRP54-201ENST00000216774 NSUN7Q8NE18 718 aaKnown RBP15.66■□□□□ 0.1
SRP54-201ENST00000216774 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
SRP54-201ENST00000216774 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
SRP54-201ENST00000216774 EXOSC10Q01780 885 aaKnown RBP15.65■□□□□ 0.1
SRP54-201ENST00000216774 ATG9AQ7Z3C6 839 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 TRIM5Q9C035 493 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 ZMYND15Q9H091 742 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 ADAMTSL3P82987 1691 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 CHGBP05060 677 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 CDC25BP30305 580 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 ADD1P35611 737 aaKnown RBP15.65■□□□□ 0.1
SRP54-201ENST00000216774 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
SRP54-201ENST00000216774 CABP4P57796 275 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 ZMYM1Q5SVZ6 1142 aa15.65■□□□□ 0.1
SRP54-201ENST00000216774 SPEF2Q9C093 1822 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 LAMA4Q16363 1823 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 GOLIM4O00461 696 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 CCDC186Q7Z3E2 898 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.09
SRP54-201ENST00000216774 DNAJC25Q9H1X3 360 aa15.64■□□□□ 0.09
SRP54-201ENST00000216774 CTDNEP1O95476 244 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 SARM1Q6SZW1 724 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 DRC7Q8IY82 874 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 ZNF274Q96GC6 653 aaPredicted RBP15.63■□□□□ 0.09
SRP54-201ENST00000216774 ZNF396Q96N95 335 aaPredicted RBP15.63■□□□□ 0.09
SRP54-201ENST00000216774 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
SRP54-201ENST00000216774 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 ATG3Q9NT62 314 aa15.63■□□□□ 0.09
SRP54-201ENST00000216774 STX1AQ16623 288 aa15.62■□□□□ 0.09
SRP54-201ENST00000216774 ZSCAN25Q6NSZ9 544 aa15.62■□□□□ 0.09
SRP54-201ENST00000216774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.62■□□□□ 0.09
SRP54-201ENST00000216774 NUP188Q5SRE5 1749 aa15.62■□□□□ 0.09
SRP54-201ENST00000216774 E7EWF7 191 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 CIAO1O76071 339 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
SRP54-201ENST00000216774 APOBRQ0VD83 1088 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 TJP1Q07157 1748 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 NBPF26B4DH59 902 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 RNF113AO15541 343 aaKnown RBP15.61■□□□□ 0.09
SRP54-201ENST00000216774 IQCB1Q15051 598 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms