RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 KCNB2Q92953 911 aa18.77■□□□□ 0.6
SNAPC1-201ENST00000216294 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
SNAPC1-201ENST00000216294 DBNLQ9UJU6 430 aaKnown RBP18.77■□□□□ 0.6
SNAPC1-201ENST00000216294 MAP3K11Q16584 847 aa18.77■□□□□ 0.59
SNAPC1-201ENST00000216294 CHST3Q7LGC8 479 aa18.77■□□□□ 0.59
SNAPC1-201ENST00000216294 DRC7Q8IY82 874 aa18.77■□□□□ 0.59
SNAPC1-201ENST00000216294 TNMDQ9H2S6 317 aa18.77■□□□□ 0.59
SNAPC1-201ENST00000216294 GOLGA6L4A6NEF3 574 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 KIAA1524Q8TCG1 905 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 DNAJC25Q9H1X3 360 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 CBX8Q9HC52 389 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 GLI3P10071 1580 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 TAF5LO75529 589 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 LEO1Q8WVC0 666 aaPredicted RBP18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 NAP1L2Q9ULW6 460 aaPredicted RBP18.76■□□□□ 0.59
SNAPC1-201ENST00000216294 CBX1P83916 185 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 Q6ZUG5 572 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 BRF1Q92994 677 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 DBNDD2Q9BQY9 259 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 RIOK3O14730 519 aaKnown RBP18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 GUCY1B3Q02153 619 aa18.75■□□□□ 0.59
SNAPC1-201ENST00000216294 SPDYE4A6NLX3 237 aa18.74■□□□□ 0.59
SNAPC1-201ENST00000216294 NAA30Q147X3 362 aaPredicted RBP18.74■□□□□ 0.59
SNAPC1-201ENST00000216294 ARID5BQ14865 1188 aa18.74■□□□□ 0.59
SNAPC1-201ENST00000216294 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
SNAPC1-201ENST00000216294 ANKRD13DQ6ZTN6 518 aa18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 NEXNQ0ZGT2 675 aa18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 GCKRQ14397 625 aa18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 FAM200AQ8TCP9 573 aa18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 C16orf45Q96MC5 204 aaPredicted RBP18.73■□□□□ 0.59
SNAPC1-201ENST00000216294 CYP21A2P08686 494 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 PSMA5P28066 241 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 STOX1Q6ZVD7 989 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 TRIM5Q9C035 493 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 NCOA5Q9HCD5 579 aaKnown RBP18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 UTYO14607 1347 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
SNAPC1-201ENST00000216294 ATP2B3Q16720 1220 aa18.71■□□□□ 0.59
SNAPC1-201ENST00000216294 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.59
SNAPC1-201ENST00000216294 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 FGD1P98174 961 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 NBPF14Q5TI25 921 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 CCDC144CPQ8IYA2 1237 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 ZNF609O15014 1411 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 SCRN1Q12765 414 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 RNF20Q5VTR2 975 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 RAB11FIP4Q86YS3 637 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 NEK1Q96PY6 1258 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
SNAPC1-201ENST00000216294 H3BQV1 296 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 APOBRQ0VD83 1088 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 TNNI3KQ59H18 835 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 IFFO2Q5TF58 517 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 FPGT-TNNI3KV9GXZ4 949 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 IGSF3O75054 1194 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 A1BGP04217 495 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 TIMM10P62072 90 aa18.69■□□□□ 0.58
SNAPC1-201ENST00000216294 C11orf57Q6ZUT1 292 aaPredicted RBP18.68■□□□□ 0.58
SNAPC1-201ENST00000216294 GTF3C6Q969F1 213 aa18.68■□□□□ 0.58
SNAPC1-201ENST00000216294 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
SNAPC1-201ENST00000216294 ZHX1Q9UKY1 873 aaPredicted RBP18.68■□□□□ 0.58
SNAPC1-201ENST00000216294 ZNF165P49910 485 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 PRIMPOLQ96LW4 560 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 HDAC5Q9UQL6 1122 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 RESTQ13127 1097 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 TTLL7Q6ZT98 887 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 ZNF594Q96JF6 807 aaPredicted RBP18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 MAP7D2Q96T17 732 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 LAMB4A4D0S4 1761 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 HIP1O00291 1037 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 GOLIM4O00461 696 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 GOLPH3LQ9H4A5 285 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
SNAPC1-201ENST00000216294 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 A0A087WZG4 1122 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 PDCP20941 246 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms