RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 ITGA6P23229 1130 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 GORABQ5T7V8 394 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 USPL1Q5W0Q7 1092 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 GDPD2Q9HCC8 539 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 SH2B1Q9NRF2 756 aaPredicted RBP9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 SH3TC1Q8TE82 1336 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 CDHR2Q9BYE9 1310 aa9.54□□□□□ -0.88
HMGXB4-201ENST00000216106 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 SYT1P21579 422 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 RPS6KB1P23443 525 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 GJB2P29033 226 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 IL6STP40189 918 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 CTSWP56202 376 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 TTLL11Q8NHH1 800 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 RIC1Q4ADV7 1423 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 STX6O43752 255 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 TTC39AQ5SRH9 613 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 ZSCAN31Q96LW9 406 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 ISY1Q9ULR0 285 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 THRAP3Q9Y2W1 955 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 SPEF2Q9C093 1822 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 CYP21A2P08686 494 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 ZSCAN23Q3MJ62 389 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 LDHAL6AQ6ZMR3 332 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 FBXO3Q9UK99 471 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 AKAP2Q9Y2D5 859 aa9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-201ENST00000216106 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 TSGA10IPQ3SY00 556 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 METTL24Q5JXM2 366 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 SLIT2O94813 1529 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 LAMA4Q16363 1823 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 SPATA31A5Q5VU36 1347 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 SPATA31A7Q8IWB4 1347 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 ZSCAN22P10073 491 aaPredicted RBP9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 SCARF1Q14162 830 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 ANKRD18BA2A2Z9 1011 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 ERVV-1B6SEH8 477 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 ZMYM1Q5SVZ6 1142 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 PI16Q6UXB8 463 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 NEK1Q96PY6 1258 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 CNNM1Q9NRU3 951 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 MYH14Q7Z406 1995 aaKnown RBP9.52□□□□□ -0.89
HMGXB4-201ENST00000216106 MAST3O60307 1309 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 NWD2Q9ULI1 1742 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 SIK1P57059 783 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 STK3Q13188 491 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 KRT32Q14532 448 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 INTS5Q6P9B9 1019 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 RIPOR2Q9Y4F9 1068 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 EIF5P55010 431 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 ATP2B3Q16720 1220 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 TMEM63CQ9P1W3 806 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 ZNF34Q8IZ26 560 aa9.51□□□□□ -0.89
HMGXB4-201ENST00000216106 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 M0R2C6 588 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 PDE8AO60658 829 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 F13A1P00488 732 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 ZAP70P43403 619 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 ITPK1Q13572 414 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 STOX1Q6ZVD7 989 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 MYH7P12883 1935 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 VPS37CA5D8V6 355 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 KCNQ2O43526 872 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 GADD45BO75293 160 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 ZNF445P59923 1031 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 USP48Q86UV5 1035 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 LRRC2Q9BYS8 371 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 MBD3O95983 291 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 OSBP2Q969R2 916 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 DSCC1Q9BVC3 393 aa9.5□□□□□ -0.89
HMGXB4-201ENST00000216106 AKAP11Q9UKA4 1901 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 TPRNQ4KMQ1 711 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 Q6ZUG5 572 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 ALDH8A1Q9H2A2 487 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 MTMR6Q9Y217 621 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 WASHC4Q2M389 1173 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 VGLL2Q8N8G2 317 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms