RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
CHERP-201ENST00000198939 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 KAT6BQ8WYB5 2073 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 ZNF215Q9UL58 517 aaPredicted RBP12.08□□□□□ -0.48
CHERP-201ENST00000198939 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
CHERP-201ENST00000198939 DBF4Q9UBU7 674 aaPredicted RBP12.07□□□□□ -0.48
CHERP-201ENST00000198939 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
CHERP-201ENST00000198939 ZSCAN25Q6NSZ9 544 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 EXOC6BQ9Y2D4 811 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 TYRO3Q06418 890 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 SKIDA1Q1XH10 827 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
CHERP-201ENST00000198939 A0A087WZG4 1122 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 KCNQ3O43525 872 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 ELF2Q15723 593 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 GORABQ5T7V8 394 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 MEIS3Q99687 375 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 ANO6Q4KMQ2 910 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
CHERP-201ENST00000198939 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
CHERP-201ENST00000198939 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
CHERP-201ENST00000198939 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 GPATCH11Q8N954 259 aa12.06□□□□□ -0.48
CHERP-201ENST00000198939 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
CHERP-201ENST00000198939 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 ERO1AQ96HE7 468 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 CHMLP26374 656 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 KRT85P78386 507 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 GTF3C6Q969F1 213 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 ITGB4P16144 1822 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 BECN2A8MW95 431 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
CHERP-201ENST00000198939 SIPA1L3O60292 1781 aaPredicted RBP12.04□□□□□ -0.48
CHERP-201ENST00000198939 SLU7O95391 586 aaKnown RBP12.04□□□□□ -0.48
CHERP-201ENST00000198939 ZNF75DP51815 510 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 FBXO38Q6PIJ6 1188 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 FUCA2Q9BTY2 467 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 POLR3GO15318 223 aaPredicted RBP12.04□□□□□ -0.48
CHERP-201ENST00000198939 ZNF165P49910 485 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 HNRNPH2P55795 449 aaKnown RBP12.04□□□□□ -0.48
CHERP-201ENST00000198939 FAM193AP78312 1265 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 FILIP1Q7Z7B0 1213 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 AK7Q96M32 723 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHERP-201ENST00000198939 ST7Q9NRC1 585 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 GJB2P29033 226 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 CBX8Q9HC52 389 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
CHERP-201ENST00000198939 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 CNTNAP4Q9C0A0 1308 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 DTNBO60941 627 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
CHERP-201ENST00000198939 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
CHERP-201ENST00000198939 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
CHERP-201ENST00000198939 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 SKILP12757 684 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 NOM1Q5C9Z4 860 aaKnown RBP12.03□□□□□ -0.48
CHERP-201ENST00000198939 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
CHERP-201ENST00000198939 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.48
CHERP-201ENST00000198939 AK2P54819 239 aa12.02□□□□□ -0.48
CHERP-201ENST00000198939 OSBPL3Q9H4L5 887 aa12.02□□□□□ -0.48
CHERP-201ENST00000198939 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.48
CHERP-201ENST00000198939 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
CHERP-201ENST00000198939 TPM4P67936 248 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 NEMFO60524 1076 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 MNS1Q8NEH6 495 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
CHERP-201ENST00000198939 RTCBQ9Y3I0 505 aaKnown RBP12.02□□□□□ -0.49
CHERP-201ENST00000198939 RPAP1Q9BWH6 1393 aaPredicted RBP12.02□□□□□ -0.49
CHERP-201ENST00000198939 ADRA2BP18089 450 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
CHERP-201ENST00000198939 KIF6Q6ZMV9 814 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 SBF2Q86WG5 1849 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 PTPRCP08575 1304 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 BTAF1O14981 1849 aa12.01□□□□□ -0.49
CHERP-201ENST00000198939 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms