RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 RBM43Q6ZSC3 357 aaKnown RBP17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 AK7Q96M32 723 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 DRC1Q96MC2 740 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 TTC14Q96N46 770 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 CASTP20810 708 aaKnown RBP17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 AK2P54819 239 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 SARM1Q6SZW1 724 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 PACS2Q86VP3 889 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 IQUBQ8NA54 791 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 PRAMEF22A3QJZ6 481 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 NOM1Q5C9Z4 860 aaKnown RBP17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 GJB2P29033 226 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 CT47A1Q5JQC4 288 aaPredicted RBP17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 SASH3O75995 380 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 UBXN4Q92575 508 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
TMEM38A-201ENST00000187762 SGSM2O43147 1006 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 PSD3Q9NYI0 1048 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 ATP2B1P20020 1258 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 MAGEA9P43362 315 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 KRT85P78386 507 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 EXOC4Q96A65 974 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 SPG7Q9UQ90 795 aa17.33■□□□□ 0.36
TMEM38A-201ENST00000187762 DTNBO60941 627 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 HOXB7P09629 217 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 LMAN1P49257 510 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 ACTN2P35609 894 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 SNX14Q9Y5W7 946 aa17.32■□□□□ 0.36
TMEM38A-201ENST00000187762 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 LARGE1O95461 756 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 CWF19L2Q2TBE0 894 aaKnown RBP17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 LSG1Q9H089 658 aaKnown RBP17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 IQCB1Q15051 598 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 PPP1R13BQ96KQ4 1090 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
TMEM38A-201ENST00000187762 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 CPA1P15085 419 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 SART3Q15020 963 aaKnown RBP17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 EP400NLQ6ZTU2 488 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 CAVIN2O95810 425 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 CCDC34Q96HJ3 373 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 CEP83Q9Y592 693 aa17.3■□□□□ 0.36
TMEM38A-201ENST00000187762 GCP02774 474 aa17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 CCDC172P0C7W6 258 aa17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 DEF6Q9H4E7 631 aa17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
TMEM38A-201ENST00000187762 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 GOLGA6L4A6NEF3 574 aa17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 IVLP07476 585 aa17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 PHRF1Q9P1Y6 1649 aaKnown RBP17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 TADA3O75528 432 aa17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
TMEM38A-201ENST00000187762 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 FAM173BQ6P4H8 233 aa17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 MNS1Q8NEH6 495 aa17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
TMEM38A-201ENST00000187762 NR1I2O75469 434 aa17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 GSDMDP57764 484 aa17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 LEKR1Q6ZMV7 388 aa17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 C11orf57Q6ZUT1 292 aaPredicted RBP17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.35
TMEM38A-201ENST00000187762 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms