RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 RAD50Q92878 1312 aa13.57□□□□□ -0.24
GPATCH1-201ENST00000170564 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 ATP5JP18859 108 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 HSPA4P34932 840 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 LRP5O75197 1615 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
GPATCH1-201ENST00000170564 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 SYCE3A1L190 88 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 NMIQ13287 307 aaPredicted RBP13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 GPATCH3Q96I76 525 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 LY75O60449 1722 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 CIAO1O76071 339 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 CTSWP56202 376 aa13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 ZNF589Q86UQ0 364 aaPredicted RBP13.55□□□□□ -0.24
GPATCH1-201ENST00000170564 LAMB2P55268 1798 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 AFF2P51816 1311 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 SNRKQ9NRH2 765 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 SPEF2Q9C093 1822 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 TAF6LQ9Y6J9 622 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 ATRNO75882 1429 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 TAF1P21675 1872 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 A0A1B0GUL7 405 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 ITGA6P23229 1130 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 ADORA1P30542 326 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 SNX14Q9Y5W7 946 aa13.54□□□□□ -0.24
GPATCH1-201ENST00000170564 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 NUCB2P80303 420 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 CCDC57Q2TAC2 916 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 HAUS7Q99871 368 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
GPATCH1-201ENST00000170564 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.24
GPATCH1-201ENST00000170564 NEK4P51957 841 aa13.52□□□□□ -0.24
GPATCH1-201ENST00000170564 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.24
GPATCH1-201ENST00000170564 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 MYO5AQ9Y4I1 1855 aaKnown RBP13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 NTSR2O95665 410 aa13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 ANAPC15P60006 121 aa13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 BRWD3Q6RI45 1802 aa13.52□□□□□ -0.25
GPATCH1-201ENST00000170564 SCARF1Q14162 830 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 ADCK5Q3MIX3 580 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 CPA1P15085 419 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 TSC1Q92574 1164 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 EPB41L2O43491 1005 aaKnown RBP13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
GPATCH1-201ENST00000170564 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
GPATCH1-201ENST00000170564 CCDC171Q6TFL3 1326 aa13.5□□□□□ -0.25
GPATCH1-201ENST00000170564 PDE8AO60658 829 aa13.5□□□□□ -0.25
GPATCH1-201ENST00000170564 KCNB2Q92953 911 aa13.5□□□□□ -0.25
GPATCH1-201ENST00000170564 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
GPATCH1-201ENST00000170564 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 TTC14Q96N46 770 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 ARAP2Q8WZ64 1704 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 A0A1B0GUL6 1792 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 ST18O60284 1047 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 SNAP23O00161 211 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 ZNF830Q96NB3 372 aaPredicted RBP13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 MAP7D2Q96T17 732 aa13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
GPATCH1-201ENST00000170564 GOLIM4O00461 696 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
GPATCH1-201ENST00000170564 TAF5LO75529 589 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms