RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CLCN6P51797 869 aa23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 BMS1Q14692 1282 aaKnown RBP23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 DPCR1Q3MIW9 517 aa23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 DBF4Q9UBU7 674 aaPredicted RBP23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 RIC3Q7Z5B4 369 aa23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 UBXN4Q92575 508 aa23.44■■□□□ 1.34
PPP1R3F-201ENST00000055335 CAVIN2O95810 425 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 PDIA4P13667 645 aaKnown RBP23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 E4F1Q66K89 784 aaPredicted RBP23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 ZFP91Q96JP5 570 aaPredicted RBP23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 ADCY9O60503 1353 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 NRDCO43847 1150 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 CYP21A2P08686 494 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 PPP1R13BQ96KQ4 1090 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 USP42Q9H9J4 1324 aaKnown RBP23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 GRM8O00222 908 aa23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 SEC31AO94979 1220 aaKnown RBP23.43■■□□□ 1.34
PPP1R3F-201ENST00000055335 CTAGE5O15320 804 aa23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 SARM1Q6SZW1 724 aa23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 KDRP35968 1356 aa23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 NEK11Q8NG66 645 aa23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 FAM160A1Q05DH4 1040 aa23.42■■□□□ 1.34
PPP1R3F-201ENST00000055335 STK38Q15208 465 aa23.41■■□□□ 1.34
PPP1R3F-201ENST00000055335 HMG20BQ9P0W2 317 aa23.41■■□□□ 1.34
PPP1R3F-201ENST00000055335 PEAK1Q9H792 1746 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 KRT32Q14532 448 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 ZCCHC17Q9NP64 241 aaKnown RBP23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 GSDMDP57764 484 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 TMCO3Q6UWJ1 677 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 ZNF396Q96N95 335 aaPredicted RBP23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 CCDC34Q96HJ3 373 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 NEUROD6Q96NK8 337 aa23.4■■□□□ 1.34
PPP1R3F-201ENST00000055335 A0A0G2JLW4 131 aa23.39■■□□□ 1.34
PPP1R3F-201ENST00000055335 NDUFA8P51970 172 aa23.39■■□□□ 1.34
PPP1R3F-201ENST00000055335 ARMCX5Q6P1M9 558 aa23.39■■□□□ 1.34
PPP1R3F-201ENST00000055335 CALCOCO1Q9P1Z2 691 aa23.39■■□□□ 1.34
PPP1R3F-201ENST00000055335 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 NBPF11Q86T75 865 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 OSCARQ8IYS5 282 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 GJB4Q9NTQ9 266 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 PCDHA7Q9UN72 937 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 SETD1BQ9UPS6 1966 aaKnown RBP23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 HNRNPH2P55795 449 aaKnown RBP23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
PPP1R3F-201ENST00000055335 RCOR1Q9UKL0 485 aa23.38■■□□□ 1.33
PPP1R3F-201ENST00000055335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.38■■□□□ 1.33
PPP1R3F-201ENST00000055335 USP31Q70CQ4 1352 aa23.38■■□□□ 1.33
PPP1R3F-201ENST00000055335 NSUN7Q8NE18 718 aaKnown RBP23.38■■□□□ 1.33
PPP1R3F-201ENST00000055335 MRPS27Q92552 414 aaKnown RBP23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 KAZALD1Q96I82 304 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 CARD6Q9BX69 1037 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 ERBB3P21860 1342 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 NPHP4O75161 1426 aaPredicted RBP23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 PNMA6AP0CW24 399 aaPredicted RBP23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 ADD1P35611 737 aaKnown RBP23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 KLHL34Q8N239 644 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 ATP1A3P13637 1013 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
PPP1R3F-201ENST00000055335 SERPINC1P01008 464 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 TFCP2Q12800 502 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 ZSWIM4Q9H7M6 989 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 STOX1Q6ZVD7 989 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 GPHNQ9NQX3 736 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 KIF2AO00139 706 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 MTX1Q13505 466 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 ARGLU1Q9NWB6 273 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 NEO1Q92859 1461 aa23.36■■□□□ 1.33
PPP1R3F-201ENST00000055335 LTKP29376 864 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 MARCKSP29966 332 aaPredicted RBP23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 TPM4P67936 248 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 CFAP100Q494V2 611 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 EPHA10Q5JZY3 1008 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 STK11IPQ8N1F8 1099 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 PDILTQ8N807 584 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 DBNDD2Q9BQY9 259 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 DBNLQ9UJU6 430 aaKnown RBP23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 FHOD1Q9Y613 1164 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 SLC3A2P08195 630 aaKnown RBP23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
PPP1R3F-201ENST00000055335 GYS2P54840 703 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 CLIC4Q9Y696 253 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 ALDH1L1O75891 902 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 CTDNEP1O95476 244 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 TEX35Q5T0J7 233 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 MYD88Q99836 296 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 C3P01024 1663 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 HAND2P61296 217 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 SLC39A6Q13433 755 aa23.34■■□□□ 1.33
PPP1R3F-201ENST00000055335 TRIM34Q9BYJ4 488 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms