RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 TOB2Q14106 344 aaPredicted RBP31.14■■■□□ 2.58
RTN4R-201ENST00000043402 HSP90AB3PQ58FF7 597 aa31.14■■■□□ 2.58
RTN4R-201ENST00000043402 ALDH8A1Q9H2A2 487 aaPredicted RBP31.14■■■□□ 2.58
RTN4R-201ENST00000043402 NUP98P52948 1817 aa31.14■■■□□ 2.58
RTN4R-201ENST00000043402 TTLL11Q8NHH1 800 aa31.13■■■□□ 2.57
RTN4R-201ENST00000043402 U3KPZ7 1027 aaPredicted RBP31.13■■■□□ 2.57
RTN4R-201ENST00000043402 NRAPQ86VF7 1730 aa31.13■■■□□ 2.57
RTN4R-201ENST00000043402 GDPD2Q9HCC8 539 aa31.13■■■□□ 2.57
RTN4R-201ENST00000043402 TBC1D2BQ9UPU7 963 aa31.13■■■□□ 2.57
RTN4R-201ENST00000043402 CYP21A2P08686 494 aa31.12■■■□□ 2.57
RTN4R-201ENST00000043402 TMEM63CQ9P1W3 806 aa31.12■■■□□ 2.57
RTN4R-201ENST00000043402 TAF7LQ5H9L4 462 aa31.12■■■□□ 2.57
RTN4R-201ENST00000043402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.12■■■□□ 2.57
RTN4R-201ENST00000043402 XAGE2Q96GT9 111 aa31.12■■■□□ 2.57
RTN4R-201ENST00000043402 HELLSQ9NRZ9 838 aa31.12■■■□□ 2.57
RTN4R-201ENST00000043402 IL6STP40189 918 aaPredicted RBP31.11■■■□□ 2.57
RTN4R-201ENST00000043402 ZMYM1Q5SVZ6 1142 aa31.11■■■□□ 2.57
RTN4R-201ENST00000043402 CDCA7Q9BWT1 371 aaPredicted RBP31.11■■■□□ 2.57
RTN4R-201ENST00000043402 GREM2Q9H772 168 aa31.11■■■□□ 2.57
RTN4R-201ENST00000043402 KRT32Q14532 448 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 DDB1Q16531 1140 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 DZIP3Q86Y13 1208 aaKnown RBP31.1■■■□□ 2.57
RTN4R-201ENST00000043402 AKAP2Q9Y2D5 859 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 PHLPP1O60346 1717 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 ANKRD1Q15327 319 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 TICAM2Q86XR7 235 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 SPEF2Q9C093 1822 aa31.1■■■□□ 2.57
RTN4R-201ENST00000043402 ITGA6P23229 1130 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 THRAP3Q9Y2W1 955 aaKnown RBP31.09■■■□□ 2.57
RTN4R-201ENST00000043402 RIPOR2Q9Y4F9 1068 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 RIC1Q4ADV7 1423 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 ERVV-1B6SEH8 477 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 CTSWP56202 376 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 NEK1Q96PY6 1258 aa31.09■■■□□ 2.57
RTN4R-201ENST00000043402 TRMT112Q9UI30 125 aaKnown RBP31.09■■■□□ 2.57
RTN4R-201ENST00000043402 UBN2Q6ZU65 1347 aa31.08■■■□□ 2.57
RTN4R-201ENST00000043402 MYH3P11055 1940 aa31.08■■■□□ 2.57
RTN4R-201ENST00000043402 IRS4O14654 1257 aaPredicted RBP31.08■■■□□ 2.57
RTN4R-201ENST00000043402 MBD3O95983 291 aa31.08■■■□□ 2.57
RTN4R-201ENST00000043402 F13A1P00488 732 aa31.08■■■□□ 2.57
RTN4R-201ENST00000043402 USP48Q86UV5 1035 aa31.08■■■□□ 2.57
RTN4R-201ENST00000043402 CCDC158Q5M9N0 1113 aa31.07■■■□□ 2.57
RTN4R-201ENST00000043402 ACSBG1Q96GR2 724 aa31.07■■■□□ 2.57
RTN4R-201ENST00000043402 MTMR6Q9Y217 621 aa31.07■■■□□ 2.57
RTN4R-201ENST00000043402 GADD45BO75293 160 aaPredicted RBP31.07■■■□□ 2.56
RTN4R-201ENST00000043402 FKBP4Q02790 459 aaKnown RBP eCLIP31.07■■■□□ 2.56
RTN4R-201ENST00000043402 MARCH10Q8NA82 808 aaPredicted RBP31.07■■■□□ 2.56
RTN4R-201ENST00000043402 RNF113AO15541 343 aaKnown RBP31.06■■■□□ 2.56
RTN4R-201ENST00000043402 SCARF1Q14162 830 aa31.06■■■□□ 2.56
RTN4R-201ENST00000043402 TTC39AQ5SRH9 613 aa31.06■■■□□ 2.56
RTN4R-201ENST00000043402 MAST3O60307 1309 aa31.06■■■□□ 2.56
RTN4R-201ENST00000043402 GORABQ5T7V8 394 aa31.06■■■□□ 2.56
RTN4R-201ENST00000043402 INTS5Q6P9B9 1019 aaKnown RBP31.05■■■□□ 2.56
RTN4R-201ENST00000043402 LDHAL6AQ6ZMR3 332 aa31.05■■■□□ 2.56
RTN4R-201ENST00000043402 STOX1Q6ZVD7 989 aa31.05■■■□□ 2.56
RTN4R-201ENST00000043402 ZNF34Q8IZ26 560 aa31.05■■■□□ 2.56
RTN4R-201ENST00000043402 DSCC1Q9BVC3 393 aa31.05■■■□□ 2.56
RTN4R-201ENST00000043402 CNPY2Q9Y2B0 182 aa31.05■■■□□ 2.56
RTN4R-201ENST00000043402 EIF5P55010 431 aaKnown RBP31.05■■■□□ 2.56
RTN4R-201ENST00000043402 SLIT2O94813 1529 aa31.04■■■□□ 2.56
RTN4R-201ENST00000043402 A0A0G2JS52 829 aa31.04■■■□□ 2.56
RTN4R-201ENST00000043402 TMEM87AQ8NBN3 555 aa31.04■■■□□ 2.56
RTN4R-201ENST00000043402 NUTM2BA6NNL0 878 aaPredicted RBP31.03■■■□□ 2.56
RTN4R-201ENST00000043402 NUTM2EB1AL46 878 aaPredicted RBP31.03■■■□□ 2.56
RTN4R-201ENST00000043402 NUTM2AQ8IVF1 878 aaPredicted RBP31.03■■■□□ 2.56
RTN4R-201ENST00000043402 ANKRD18BA2A2Z9 1011 aa31.03■■■□□ 2.56
RTN4R-201ENST00000043402 HSPD1P10809 573 aaKnown RBP31.03■■■□□ 2.56
RTN4R-201ENST00000043402 METTL24Q5JXM2 366 aa31.03■■■□□ 2.56
RTN4R-201ENST00000043402 FAM43AQ8N2R8 423 aa31.03■■■□□ 2.56
RTN4R-201ENST00000043402 SPATA31A5Q5VU36 1347 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 SPATA31A7Q8IWB4 1347 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 M0R2C6 588 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 OSBP2Q969R2 916 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 A0A0G2JLW4 131 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 PDE8AO60658 829 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 ATP2B3Q16720 1220 aa31.02■■■□□ 2.56
RTN4R-201ENST00000043402 LAMA4Q16363 1823 aa31.01■■■□□ 2.55
RTN4R-201ENST00000043402 ATP6V1AP38606 617 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 STK3Q13188 491 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 PI16Q6UXB8 463 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 Q6ZUG5 572 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 VGLL2Q8N8G2 317 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 SYCE3A1L190 88 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 ZAP70P43403 619 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 CRKLP46109 303 aaKnown RBP31■■■□□ 2.55
RTN4R-201ENST00000043402 CCDC87Q9NVE4 849 aa31■■■□□ 2.55
RTN4R-201ENST00000043402 NASPP49321 788 aaPredicted RBP30.99■■■□□ 2.55
RTN4R-201ENST00000043402 CNNM1Q9NRU3 951 aa30.99■■■□□ 2.55
RTN4R-201ENST00000043402 LOC102724428A0A0B4J2F2 783 aa30.99■■■□□ 2.55
RTN4R-201ENST00000043402 SIK1P57059 783 aa30.99■■■□□ 2.55
RTN4R-201ENST00000043402 ATP6V1DQ9Y5K8 247 aa30.99■■■□□ 2.55
RTN4R-201ENST00000043402 VPS37CA5D8V6 355 aaPredicted RBP30.98■■■□□ 2.55
RTN4R-201ENST00000043402 ITPK1Q13572 414 aa30.98■■■□□ 2.55
RTN4R-201ENST00000043402 LARP1BQ659C4 914 aaKnown RBP30.98■■■□□ 2.55
RTN4R-201ENST00000043402 RBSNQ9H1K0 784 aa30.98■■■□□ 2.55
RTN4R-201ENST00000043402 LRRC2Q9BYS8 371 aa30.98■■■□□ 2.55
RTN4R-201ENST00000043402 LRSAM1Q6UWE0 723 aa30.97■■■□□ 2.55
RTN4R-201ENST00000043402 MYH14Q7Z406 1995 aaKnown RBP30.97■■■□□ 2.55
RTN4R-201ENST00000043402 AKAP11Q9UKA4 1901 aa30.96■■■□□ 2.55
RTN4R-201ENST00000043402 SUSD4Q5VX71 490 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms