RNA–Protein interactions for RNA: ENSMUST00000148811.1

Ttc39b-206, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 3 BASIC

Gene Ttc39b, Length 727 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-206ENSMUST00000148811 Chd5A2A8L1 1946 aa12.93□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 NinQ61043 2035 aa12.93□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 GabrdP22933 449 aa12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Atp8a2P98200 1148 aa12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Plbd2Q3TCN2 594 aa12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Dpf2Q61103 391 aaKnown RBP12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Plcd4Q8K3R3 807 aa12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Cluap1Q8R3P7 413 aa12.92□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 NeflP08551 543 aa12.91□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Casp1P29452 402 aa12.91□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Zcwpw1Q6IR42 630 aa12.91□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Znf428Q8C1M2 176 aa12.91□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Sh3bp5lQ99LH9 392 aa12.91□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Pde8bE9Q4S1 865 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Mcmdc2E9Q956 681 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 AampJ3QN89 436 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Ell2Q3UKU1 639 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Ppp4r3aQ6P2K6 820 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Slc14a2Q8R4T9 930 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 HnrnpuQ8VEK3 800 aaKnown RBP12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Pik3ap1Q9EQ32 811 aa12.9□□□□□ -0.34
Ttc39b-206ENSMUST00000148811 Nphp3Q7TNH6 1325 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Tpx2A2APB8 745 aaKnown RBP12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 CfhP06909 1234 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Nlrp1aQ2LKU9 1182 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 4930504O13RikQ8C5Z9 145 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Plekhg6Q8R0J1 787 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Smarca5Q91ZW3 1051 aaKnown RBP12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Armcx1Q9CX83 456 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Rbm33Q9CXK9 1231 aaKnown RBP12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Igf2rQ07113 2483 aaKnown RBP12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Carmil3Q3UFQ8 1375 aa12.89□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Kdm3aQ6PCM1 1323 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Akap2O54931 893 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Rhbdl3P58873 404 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Atp2b3Q0VF55 1220 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Vil1Q62468 827 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Fam102bQ8BQS4 339 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Prkrip1Q9CWV6 186 aaKnown RBP12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Fbxo3Q9DC63 480 aa12.88□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Vsig10D3YX43 558 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Neurod6P48986 337 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Timm10P62073 90 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 NogP97466 232 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Map3k9Q3U1V8 1077 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Ccdc51Q3URS9 406 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Fam84aQ9D650 292 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Sytl4Q9R0Q1 673 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Myh7Q91Z83 1935 aa12.87□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Speer4dL7N216 212 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Thrap3Q569Z6 951 aaKnown RBP12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 NfkbibQ60778 359 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Ufl1Q8CCJ3 793 aaKnown RBP12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Spon1Q8VCC9 807 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 FanclQ9CR14 375 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Ly6iQ9WU67 134 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Ccne2Q9Z238 404 aa12.86□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Atg4a-psA0A0G2JFS9 396 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Eddm13E9Q7F5 164 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Gm4340L7N2C4 268 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Sept1P42209 366 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Sptlc3Q8BG54 563 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Atg4aQ8C9S8 396 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 ParvgQ9ERD8 331 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Kcnq5Q9JK45 933 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Tnnt3Q9QZ47 272 aa12.85□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Slc4a1P04919 929 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 XpcP51612 930 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Csrnp1P59054 583 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Gsdma2Q32M21 443 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Calr4Q3TQS0 420 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 DbnlQ62418 436 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Glis3Q6XP49 780 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Peak1Q69Z38 1735 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Trpm7Q923J1 1863 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Pappa2E9PZ87 1789 aa12.84□□□□□ -0.35
Ttc39b-206ENSMUST00000148811 Ppef1O35655 650 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 AaasP58742 546 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Fchsd1Q6PFY1 688 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Sept9Q80UG5 583 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Ift57Q8BXG3 429 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Mrpl12Q9DB15 201 aaKnown RBP12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 CarsQ9ER72 831 aaKnown RBP12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Irs4Q9Z0Y7 1216 aa12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Polr2aP08775 1970 aaKnown RBP12.83□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Myh6Q02566 1938 aaKnown RBP12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Ankrd63A2ARS0 390 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Psmd1Q3TXS7 953 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Ddx46Q569Z5 1032 aaKnown RBP12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Asap2Q7SIG6 958 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 WdpcpQ8C456 722 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Mtmr2Q9Z2D1 643 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Setdb1O88974 1307 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 NrapQ80XB4 1728 aa12.82□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 NesQ6P5H2 1864 aaKnown RBP12.81□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 TsksO54887 585 aa12.81□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Zc3h15Q3TIV5 426 aaKnown RBP12.81□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Zbtb45Q52KG4 520 aa12.81□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 Adgre1Q61549 931 aa12.81□□□□□ -0.36
Ttc39b-206ENSMUST00000148811 CbarpQ66L44 698 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms