RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Atp12aQ9Z1W8 1035 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Usp54Q8BL06 1588 aaKnown RBP18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ankle2Q6P1H6 964 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Xpo4Q9ESJ0 1151 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ifit1Q64282 463 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 TxlnbQ8VBT1 685 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Sil1Q9EPK6 465 aa18.2■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ift88Q61371 824 aa18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ctdp1Q7TSG2 960 aa18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ranbp1P34022 203 aaKnown RBP18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Rad23bP54728 416 aa18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Myo3aQ8K3H5 1613 aa18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Luc7l2Q7TNC4 392 aaKnown RBP18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Erlin1Q91X78 346 aa18.19■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Fam170aQ66LM6 333 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Lrrc8aQ80WG5 810 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Lonp2Q9DBN5 852 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Col4a3bpQ9EQG9 624 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Cfap65Q3V0B4 1847 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Kif1bQ60575 1816 aaKnown RBP18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Abca16E9PWJ7 1678 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ncapg2Q6DFV1 1138 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Acnat2Q8BGG9 420 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Btn2a2A4QPC6 514 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ddit3P35639 168 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Psmb7P70195 277 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Brpf3B2KF05 1204 aaKnown RBP18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Pkp1P97350 728 aaKnown RBP18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 MpndQ3TV65 487 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Cnga2Q62398 664 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Tmem266Q8BZB3 538 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Slc5a1Q8C3K6 665 aa18.18■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Elmsan1E9Q2I4 1089 aaKnown RBP18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Cd22P35329 862 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Cwc25Q9DBF7 416 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Oxsr1Q6P9R2 527 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ercc6lQ8BHK9 1240 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Hfm1D3Z4R1 1434 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Setd1aE9PYH6 1716 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Tspyl3Q3UYP3 334 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ppp4r3bQ922R5 820 aa18.17■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Uggt2E9Q4X2 1504 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Znf518aB2RRF6 1478 aaKnown RBP18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Map3k11Q80XI6 850 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ccdc7Q9D541 371 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Zbtb43Q9DAI4 467 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Trpm2Q91YD4 1506 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 LratQ9JI60 231 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ets1P27577 440 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Mctp2Q5RJH2 878 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Lrrcc1Q69ZB0 1026 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 SdsQ8VBT2 327 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Clasp1Q80TV8 1535 aaKnown RBP18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Disp3A3KFU9 1347 aa18.16■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 1700113H08RikE9Q9Q5 327 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Atp1a2Q6PIE5 1020 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Rassf4Q8CB96 322 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Kcnk13Q8R1P5 405 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Abcc1O35379 1528 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Eif2ak4Q9QZ05 1648 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Plekhd1B2RPU2 505 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Tlr7P58681 1050 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Csrnp1P59054 583 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ttll12Q3UDE2 639 aa18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Nop2Q922K7 793 aaKnown RBP18.15■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Ptcd1Q8C2E4 695 aaKnown RBP18.14■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 NpatQ8BMA5 1420 aa18.14■□□□□ 0.5
Sptbn4-204ENSMUST00000108364 Cep170Q6A065 1588 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Hoxc9P09633 260 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Sun3Q5SS91 320 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Ppp4r3aQ6P2K6 820 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Rbm17Q8JZX4 405 aaKnown RBP18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Atg3Q9CPX6 314 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Atp2b1G5E829 1220 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Samsn1P57725 372 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Zfp202Q8C879 641 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 RragbQ6NTA4 374 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Cfap69Q8BH53 942 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Nfe2l3Q9WTM4 660 aa18.14■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Prl7a2O54831 253 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Erlin2Q8BFZ9 340 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Dnajc25A2ALW5 357 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Actn3O88990 900 aaKnown RBP18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Atp2b3Q0VF55 1220 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 VeztQ3ZK22 780 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Rdm1Q9CQK3 281 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Diaph1O08808 1255 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Ccdc57Q6PHN1 1016 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 GptQ8QZR5 496 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Uchl5Q9WUP7 329 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Igsf3Q6ZQA6 1194 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Lrrc2Q8VDB8 371 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Trim34aQ99PP6 485 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Efcab6Q6P1E8 1516 aa18.13■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 IqcgQ80W32 419 aa18.12■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Ifi35Q9D8C4 286 aa18.12■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Golga5Q9QYE6 729 aa18.12■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 AmfrQ9R049 643 aa18.12■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Igflr1Q3U4N7 345 aa18.12■□□□□ 0.49
Sptbn4-204ENSMUST00000108364 Lrrfip1Q3UZ39 729 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms