RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Hps4Q99KG7 671 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Sil1Q9EPK6 465 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 1700123L14RikQ3V2K7 440 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Rbm33Q9CXK9 1231 aaKnown RBP12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 KdrP35918 1367 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Zbtb38Q3LR78 1197 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Pdzrn3Q69ZS0 1063 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 IarsQ8BU30 1262 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Cog6Q8R3I3 657 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Tpd52l2Q9CYZ2 220 aaKnown RBP12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Sept14Q9DA97 430 aa12.35□□□□□ -0.43
Limch1-201ENSMUST00000038188 Clrn2B2RVW2 232 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 AnlnQ8K298 1121 aaKnown RBP12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Stag1Q9D3E6 1258 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Myoz2Q9JJW5 264 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 PicalmQ7M6Y3 660 aaKnown RBP12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Rfc4Q99J62 364 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 AlkP97793 1621 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Ahdc1Q6PAL7 1594 aaKnown RBP12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 D830030K20RikE9PYQ5 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Gm3043K7N693 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Gm16440K7N6G6 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Gm2244L7N2A3 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Gm3278L7N2D2 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Gm8271L7N2E2 218 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Arhgef6Q8K4I3 771 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Trpc5Q9QX29 975 aa12.34□□□□□ -0.43
Limch1-201ENSMUST00000038188 Calm1P0DP26 149 aaKnown RBP12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 Calm2P0DP27 149 aaKnown RBP12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 Calm3P0DP28 149 aaKnown RBP12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 VrtnQ3SYK4 740 aa12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 Cnot6lQ8VEG6 555 aa12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 Erich6bQ9D4S6 220 aa12.33□□□□□ -0.43
Limch1-201ENSMUST00000038188 Taf12Q8VE65 161 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gm30191A0A0U1RNT7 187 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Prr5lA2AVJ5 370 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Sult6b1P0CC03 303 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Traf1P39428 409 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Eif4a1P60843 406 aaKnown RBP12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Ppip5k2Q6ZQB6 1129 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Sumf1Q8R0F3 372 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Vti1aO89116 217 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Jakmip3Q5DTN8 844 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Sh3d21Q7TSG5 549 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Strip1Q8C079 837 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Ak7Q9D2H2 614 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Nol7Q9D7Z3 254 aaKnown RBP12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gemin5Q8BX17 1502 aaKnown RBP12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Usp19Q3UJD6 1360 aa12.33□□□□□ -0.44
Limch1-201ENSMUST00000038188 Eya2O08575 532 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Art2aP17981 287 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Scaf1Q5U4C3 1256 aaKnown RBP12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 WtapQ9ER69 396 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Prg3Q9JL95 222 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Prss51A0A286YDY8 319 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Tktl2Q9D4D4 627 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Mug2P28666 1451 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Parp1P11103 1013 aaKnown RBP12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Rsph3aQ3UFY4 516 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Snap47Q8R570 413 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Pik3ap1Q9EQ32 811 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Timm10P62073 90 aa12.32□□□□□ -0.44
Limch1-201ENSMUST00000038188 Themis2Q91YX0 663 aa12.31□□□□□ -0.44
Limch1-201ENSMUST00000038188 2310002L09RikQ9D7L5 217 aa12.31□□□□□ -0.44
Limch1-201ENSMUST00000038188 Bcl11aQ9QYE3 773 aa12.31□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gja10Q9WUS4 505 aa12.31□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gnat2P50149 354 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Haus6Q6NV99 933 aaKnown RBP12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Lbhd1A0A087WPA0 259 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Parp2O88554 559 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Kiaa1024Q8K3V7 917 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Mtfr1lQ9CWE0 289 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Dhx38Q80X98 1228 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Atg3Q9CPX6 314 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Arhgap23Q69ZH9 1483 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gm13023A2A8N2 498 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Fam193aQ8CGI1 1231 aaKnown RBP12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Tubb6Q922F4 447 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Ppfia3P60469 1194 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Cct2P80314 535 aaKnown RBP12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 HelbQ6NVF4 1074 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Lonrf3Q9D4H7 753 aa12.3□□□□□ -0.44
Limch1-201ENSMUST00000038188 Necab1Q8BG18 352 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Lrrc45Q8CIM1 670 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Igsf1Q7TQA1 1317 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Prl3d3A0A0M6L0J6 224 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Lrit1Q8K099 624 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Kif18aQ91WD7 886 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Zbtb43Q9DAI4 467 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Plxnc1Q9QZC2 1574 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Iqsec2Q5DU25 1478 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Nap1l1P28656 391 aaKnown RBP12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Dpp9Q8BVG4 862 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Btn2a2A4QPC6 514 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Ppp2r3aB2RXC8 1150 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Mpp4Q6P7F1 635 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Gpr101Q80T62 511 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Nxf1Q99JX7 618 aaKnown RBP12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 Dip2aQ8BWT5 1523 aa12.29□□□□□ -0.44
Limch1-201ENSMUST00000038188 TnksQ6PFX9 1320 aa12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms