RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Adora1Q60612 326 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Pde1cQ64338 706 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 CtifQ6PEE2 600 aaKnown RBP13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ankib1Q6ZPS6 1085 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dusp9Q7TNL7 452 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Terf2ipQ91VL8 393 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Smc1bQ920F6 1248 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Tlcd1Q99JT6 247 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Frmpd2A0A140LI67 1392 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Hoxc9P09633 260 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Exoc8Q6PGF7 716 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Fam228bQ497Q6 232 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Zfp202Q8C879 641 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 DymQ8CHY3 669 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cdc42bpbQ7TT50 1713 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cnksr1A2A9K7 700 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Hmx1O70218 332 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cyp2d11P24457 504 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Rrp1P56183 494 aaKnown RBP13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 CoilQ5SU73 570 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ehd2Q8BH64 543 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Agtpbp1Q641K1 1218 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Etf1Q8BWY3 437 aaKnown RBP13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Sil1Q9EPK6 465 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 CoblQ5NBX1 1337 aaKnown RBP13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Prkab2Q6PAM0 271 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ccdc93Q7TQK5 629 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Bmp2kQ91Z96 1138 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Atp1a4Q9WV27 1032 aa13.07□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Scaf1Q5U4C3 1256 aaKnown RBP13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Krt82Q99M74 516 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ccdc47Q9D024 483 aaKnown RBP13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Zfp597E9Q6S0 419 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Abca6Q8K441 1624 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cdk4P30285 303 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Nbr1P97432 988 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ctdp1Q7TSG2 960 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Evc2Q8K1G2 1220 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Baiap2l1Q9DBJ3 514 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Stard3nlQ9DCI3 235 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Zcchc11B2RX14 1644 aaKnown RBP13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Clic4Q9QYB1 253 aa13.06□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Abcf1Q6P542 837 aaKnown RBP13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dusp10Q9ESS0 483 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ccdc57Q6PHN1 1016 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 SympkQ80X82 1284 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Zc3h6Q8BYK8 1177 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Nfatc2ipO09130 412 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dnajc10Q9DC23 793 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dapk3O54784 448 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 XpcP51612 930 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Evi5P97366 809 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Prdm1Q60636 856 aa13.05□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cep170bQ80U49 1574 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Sdc2P43407 202 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Cep112Q5PR68 954 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dnmt1P13864 1620 aaKnown RBP13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 AceP09470 1312 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Rnf17Q99MV7 1640 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Myl10Q62082 202 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Gdap1l1Q8VE33 370 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ankrd1Q9CR42 319 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Smc1aQ9CU62 1233 aaKnown RBP13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Iqca1Q9CUL5 857 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 DbnlQ62418 436 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Dmrt2Q8BG36 561 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Tsen34Q8BMZ5 316 aa13.04□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Slc1a4O35874 532 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Kmt5bQ3U8K7 883 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Rai14Q9EP71 979 aaKnown RBP13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 AatfQ9JKX4 526 aaKnown RBP13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Aox2Q5SGK3 1345 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Aox4Q3TYQ9 1336 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Pbrm1Q8BSQ9 1634 aaKnown RBP13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Gm29094F6Q785 221 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Washc4Q3UMB9 1173 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 StrbpQ91WM1 672 aaKnown RBP13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 BrapQ99MP8 591 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 MthfsQ9D110 203 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Eif2ak4Q9QZ05 1648 aa13.03□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Trim55G3X8Y1 545 aa13.02□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Surf1P09925 306 aa13.02□□□□□ -0.32
Topbp1-201ENSMUST00000035164 NpeppsQ11011 920 aa13.02□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ift122Q6NWV3 1182 aa13.02□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Amotl1Q9D4H4 968 aa13.02□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Ttll7A4Q9F0 912 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Slc35g1Q8BY79 368 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 LtkP08923 888 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tnni2P13412 182 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 PzpQ61838 1495 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc73Q8CDM4 1066 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tab2Q99K90 693 aa13.02□□□□□ -0.33
Topbp1-201ENSMUST00000035164 TrdnE9Q9K5 693 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Chaf1aQ9QWF0 911 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 ChmQ9QXG2 665 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Abcc4E9Q236 1325 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ces1hD3Z298 562 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Abcd1P48410 736 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Atg3Q9CPX6 314 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc121E9Q6D3 323 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms