RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Rgs12Q8CGE9 1381 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Capn2O08529 700 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Znf326O88291 580 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Frat1P70339 274 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Slu7Q8BHJ9 585 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Mtmr3Q8K296 1196 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Fbxo3Q9DC63 480 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Stk3Q9JI10 497 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Parp14Q2EMV9 1817 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 BcorQ8CGN4 1759 aa14.15□□□□□ -0.14
Ufd1-201ENSMUST00000005394 Kif3cO35066 796 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Mtx1P47802 317 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Spag5Q7TME2 1165 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Rps6kb1Q8BSK8 525 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ift57Q8BXG3 429 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Rassf4Q8CB96 322 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Kcnk13Q8R1P5 405 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Hmg20bQ9Z104 317 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Dlg5E9Q9R9 1921 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tnks1bp1P58871 1720 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 CgnP59242 1191 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Kmt5bQ3U8K7 883 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Rnf20Q5DTM8 973 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 RgmbQ7TQ33 436 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Me3Q8BMF3 604 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tceal9Q9DD24 104 aa14.14□□□□□ -0.15
Ufd1-201ENSMUST00000005394 NmiO35309 314 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Cyp2d11P24457 504 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ano8Q6PB70 1060 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Taok3Q8BYC6 898 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Polr3gQ6NXY9 223 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Bend3Q6PAL0 825 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Prdm4Q80V63 803 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Bicd2Q921C5 820 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 ZwintQ9CQU5 252 aa14.13□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Jakmip2D3YXK0 820 aa14.12□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Serpinb6bO08804 377 aa14.12□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tmem132eQ6IEE6 982 aa14.12□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Dhx40Q6PE54 779 aaKnown RBP14.12□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Mast2Q60592 1734 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 EspnlQ3UYR4 1005 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Zfp317Q8C0Q5 607 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Echdc1Q9D9V3 322 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tulp1Q9Z273 543 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ahnak2E9PYB0 1738 aaKnown RBP14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tbc1d4Q8BYJ6 1307 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Eya1P97767 591 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Chpf2Q3UU43 768 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ppp1r10Q80W00 888 aaKnown RBP14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ano1Q8BHY3 960 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Cyp2d12Q8BVD2 504 aa14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Zranb2Q9R020 330 aaKnown RBP14.11□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ccdc112A0AUP1 442 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 F2rP30558 430 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Stat1P42225 749 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ica1lQ3TY65 431 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Arid5bQ8BM75 1188 aaKnown RBP14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Q8BZJ8 459 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Tsr2Q8C8T8 191 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Kiaa0232Q80U59 1396 aaKnown RBP14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Akap11E9Q777 1895 aa14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ktn1Q61595 1327 aaKnown RBP14.1□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Irx2P81066 474 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Anp32eP97822 260 aaKnown RBP14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Usp28Q5I043 1051 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Trak2Q6P9N8 913 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Smarcc2Q6PDG5 1213 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Slc20a2Q80UP8 656 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Zmynd15Q8C0R7 736 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Sox30Q8CGW4 782 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Rhot2Q8JZN7 620 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Kat6bQ8BRB7 1872 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Snap23O09044 210 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 CrklP47941 303 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 GscQ02591 256 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 RbsnQ80Y56 783 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Hook1Q8BIL5 728 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 OptnQ8K3K8 584 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Snw1Q9CSN1 536 aaKnown RBP14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Elf2Q9JHC9 593 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Ly75Q60767 1723 aa14.09□□□□□ -0.15
Ufd1-201ENSMUST00000005394 Znf568E9PYI1 671 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Lnx1O70263 728 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Tlr7P58681 1050 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ccdc34Q3UI66 367 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Slc4a10Q5DTL9 1118 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Polr3dQ91WD1 398 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Tcof1O08784 1320 aaKnown RBP14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Eif3aP23116 1344 aaKnown RBP14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Adamtsl1Q8BLI0 1745 aa14.08□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ugt1a5B2RT14 529 aa14.07□□□□□ -0.16
Ufd1-201ENSMUST00000005394 4930523C07RikE9Q2T4 99 aa14.07□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ctdnep1Q3TP92 244 aa14.07□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Ubash3aQ3V3E1 624 aa14.07□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Frmd3Q8BHD4 595 aa14.07□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Robo1O89026 1612 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Lrriq3Q14DL3 633 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Cdc37Q61081 379 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Mns1Q61884 491 aa14.06□□□□□ -0.16
Ufd1-201ENSMUST00000005394 Zpr1Q62384 459 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms