RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GCNT2Q8N0V5 402 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM123Q8N131 208 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 ZIC4Q8N9L1 334 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CYB561A3Q8NBI2 242 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 NPEPL1Q8NDH3 523 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 BBS1Q8NFJ9 593 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 OR8J1Q8NGP2 316 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MBD3L2Q8NHZ7 208 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CNIH3Q8TBE1 160 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TRUB1Q8WWH5 349 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 UBE2FQ969M7 185 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SLC25A44Q96H78 314 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 LRR1Q96L50 414 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 KCNK17Q96T54 332 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 ALG12Q9BV10 488 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MED20Q9H944 212 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 HINT3Q9NQE9 182 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 RPRD1BQ9NQG5 326 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 GLRX2Q9NS18 164 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 DNAJC27Q9NZQ0 273 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 VSX1Q9NZR4 365 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 Q9UFV3 132 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 EMC9Q9Y3B6 208 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 LRRC42Q9Y546 428 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 SLC22A23A1A5C7 686 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 PRSS37A4D1T9 235 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 OR6C68A6NDL8 312 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 HSPB2A8KAH6 182 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CENPBD1B2RD01 187 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 M0R3G1 203 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 ENTPD6O75354 484 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 MRPL33O75394 65 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CRLF1O75462 422 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF432O94892 652 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 TMIGD3P0DMS9 266 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CLUP10909 449 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 SLC25A1P53007 311 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 EFNB1P98172 346 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 TEKQ02763 1124 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 FMODQ06828 376 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 DBPQ10586 325 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 HSPB2Q16082 182 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF362Q5T0B9 420 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 PRSS57Q6UWY2 283 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 FAM214BQ7L5A3 538 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 NUFIP2Q7Z417 695 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 BCDIN3DQ7Z5W3 292 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CPOQ8IVL8 374 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 GID4Q8IVV7 300 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 C20orf196Q8IYI0 205 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CNEP1R1Q8N9A8 125 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 OR9Q1Q8NGQ5 310 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 OR6N1Q8NGY5 312 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 RHOXF1Q8NHV9 184 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 RNASE6Q93091 150 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM54Q969K7 222 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 INTS12Q96CB8 462 aaKnown RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 Q96MF0 132 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF582Q96NG8 517 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-228ENST00000641847 SNX18Q96RF0 628 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 DDOQ99489 341 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 NMNAT2Q9BZQ4 307 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 SYT4Q9H2B2 425 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 C12orf49Q9H741 205 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 CLN6Q9NWW5 311 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 UBAP1Q9NZ09 502 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 LRCH1Q9Y2L9 728 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 PCDHGB5Q9Y5G0 923 aa8.28□□□□□ -1.08
PHGDH-228ENST00000641847 DOCK7Q96N67 2140 aa8.27□□□□□ -1.08
PHGDH-228ENST00000641847 CCDC182A6NF36 153 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 AHCYL1O43865 530 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 WBP4O75554 376 aaKnown RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 GYPBP06028 91 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NR2C1P13056 603 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 CTLA4P16410 223 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 SPI1P17947 270 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 CD53P19397 219 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 EDNRAP25101 427 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 FMO3P31513 532 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PYCR1P32322 319 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NTF4P34130 210 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 TIMP3P35625 211 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ASCL1P50553 236 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NUDT6P53370 316 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 CDH11P55287 796 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 RPS7P62081 194 aaKnown RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 LGALS3BPQ08380 585 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 FOXF2Q12947 444 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 APOFQ13790 326 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 OCLNQ16625 522 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 SMN1Q16637 294 aaKnown RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 KLHL12Q53G59 568 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms