RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TMEM27Q9HBJ8 222 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 STARD5Q9NSY2 213 aa12.49□□□□□ -0.41
SCARB2-227ENST00000640957 HEATR5AQ86XA9 2040 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 YIF1AO95070 293 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 FAM53BQ14153 422 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 DCST2Q5T1A1 773 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
SCARB2-227ENST00000640957 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 TEX19Q8NA77 164 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 RRNAD1Q96FB5 475 aaKnown RBP12.48□□□□□ -0.41
SCARB2-227ENST00000640957 CMKLR1Q99788 373 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 SLC27A6Q9Y2P4 619 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 MED12Q93074 2177 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 A0A1W2PPH5 198 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 SNAPINO95295 136 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 ABCD3P28288 659 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
SCARB2-227ENST00000640957 IL13RA1P78552 427 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 PLAURQ03405 335 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 VITQ6UXI7 678 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 OR1J4Q8NGS1 313 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 PAPOLGQ9BWT3 736 aaKnown RBP12.48□□□□□ -0.41
SCARB2-227ENST00000640957 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
SCARB2-227ENST00000640957 A0A0D9SG52 128 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 A0A1B0GV90 55 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SULT2B1O00204 365 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ADAP1O75689 374 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SFTA3P0C7M3 94 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SLC6A6P31641 620 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ACTA2P62736 377 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ACTG2P63267 376 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SPOCK1Q08629 439 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SLC9A3R2Q15599 337 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ENPP7Q6UWV6 458 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 USP53Q70EK8 1073 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 JAGN1Q8N5M9 183 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 OR5AP2Q8NGF4 316 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 JSRP1Q96MG2 331 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SFXN1Q9H9B4 322 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 MBNL1Q9NR56 388 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 COL4A6Q14031 1691 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 PQLC2LA1A4F0 135 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 C1QTNF3-AMACRE9PGA6 284 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 SPINT1O43278 529 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 XRCC3O43542 346 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 RAB40ALP0C0E4 278 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 CDKN2AP42771 156 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 INPP5JQ15735 1006 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 DHRS7BQ6IAN0 325 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 LILRA6Q6PI73 481 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF227Q86WZ6 799 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 RAB40AQ8WXH6 277 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 INPP5EQ9NRR6 644 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 INSL6Q9Y581 213 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 COLCA2A8K830 154 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 RBM34P42696 430 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ADAM8P78325 824 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 PRDX1Q06830 199 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 EBPQ15125 230 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 Q499Y3 187 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ACOT7LQ6ZUV0 252 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ANKRD33Q7Z3H0 272 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF784Q8NCA9 323 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 AKR7LQ8NHP1 331 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 RSPRY1Q96DX4 576 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF681Q96N22 645 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 NECAB3Q96P71 396 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 MRM2Q9UI43 246 aaKnown RBP12.47□□□□□ -0.41
SCARB2-227ENST00000640957 CES1P1Q9UKY3 287 aa12.47□□□□□ -0.41
SCARB2-227ENST00000640957 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 ANAPC1Q9H1A4 1944 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 CLN5O75503 358 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 CSF1P09603 554 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 S100A12P80511 92 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
SCARB2-227ENST00000640957 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.46□□□□□ -0.41
SCARB2-227ENST00000640957 SLC35F3Q8IY50 421 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF615Q8N8J6 731 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 OR51A2Q8NGJ7 313 aa12.46□□□□□ -0.41
SCARB2-227ENST00000640957 SMARCD2Q92925 531 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms