RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PCSK4Q6UW60 755 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 LCLAT1Q6UWP7 414 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 ZNF621Q6ZSS3 439 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 HORMAD1Q86X24 394 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 CCDC185Q8N715 623 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 OR7A2PQ8NGA2 310 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 OR5M1Q8NGP8 315 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 C8orf46Q8TAG6 207 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 TFGQ92734 400 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 UBE2E3Q969T4 207 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 SLITRK2Q9H156 845 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 WDR54Q9H977 334 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 SPEGQ15772 3267 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 NSG1A0A0A6YYJ2 146 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 NPIPA5A0A0B4J1W7 369 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 NPIPA5E9PKD4 350 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 ETV2O00321 342 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 PSTPIP1O43586 416 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 SLC19A2O60779 497 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 FZD7O75084 574 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 FARS2O95363 451 aaKnown RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 HLA-HP01893 362 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 OCMP0CE72 109 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 IGHV4-31P0DP07 118 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 BGNP21810 368 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 HTR2CP28335 458 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 NSG1P42857 185 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 MAGEA6P43360 314 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 CSNK1A1P48729 337 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 DNA2P51530 1060 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 GAS1P54826 345 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 ERVK11-1P61568 191 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 RPS15AP62244 130 aaKnown RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 UBE2V2Q15819 145 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 DNAL1Q4LDG9 190 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 TMEM35AQ53FP2 167 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 SAMD4BQ5PRF9 694 aaKnown RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 RESP18Q5W5W9 173 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 LRRC31Q6UY01 552 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 CDRT4Q8N9R6 151 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 OR6X1Q8NH79 312 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 TMEM239Q8WW34 195 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 ISOC2Q96AB3 205 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 PPP1R14BQ96C90 147 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 C9orf72Q96LT7 481 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 KIR3DX1Q9H7L2 352 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 APOBEC3GQ9HC16 384 aaKnown RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 RMND1Q9NWS8 449 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 CLEC4EQ9ULY5 219 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 EIF3LQ9Y262 564 aaKnown RBP6.29□□□□□ -1.4
NECAP1-220ENST00000639841 COQ4Q9Y3A0 265 aa6.29□□□□□ -1.4
NECAP1-220ENST00000639841 A0A1W2PRD5 423 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 RGS16O15492 202 aaPredicted RBP6.28□□□□□ -1.4
NECAP1-220ENST00000639841 CLDN11O75508 207 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 NSA2O95478 260 aaKnown RBP6.28□□□□□ -1.4
NECAP1-220ENST00000639841 C1orf105O95561 183 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 IGSF6O95976 241 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 IGHG4P01861 327 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 ALDOBP05062 364 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 SSTR2P30874 369 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 ARPC4P59998 168 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 ATP6V0D1P61421 351 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 RPS21P63220 83 aaKnown RBP6.28□□□□□ -1.4
NECAP1-220ENST00000639841 RGS1Q08116 209 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 STX5Q13190 355 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 SPATS1Q496A3 300 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 SLC22A6Q4U2R8 563 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 DCAF10Q5QP82 559 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 PRAMEF17Q5VTA0 474 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 UTS2BQ765I0 119 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 BHLHA9Q7RTU4 235 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 HSD11B1LQ7Z5J1 315 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 STK40Q8N2I9 435 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 OR4D9Q8NGE8 314 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 LGALS14Q8TCE9 139 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 RNF170Q96K19 258 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 IL12RB2Q99665 862 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 ATP5SQ99766 215 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 ZNF251Q9BRH9 671 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
NECAP1-220ENST00000639841 FOXJ2Q9P0K8 574 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
NECAP1-220ENST00000639841 A0A0A6YYH2 397 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 LRIT2A6NDA9 550 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 A6NJ64 397 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 E7ESA3 106 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SIRPB1O00241 398 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SMIM10L1P0DMW3 83 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 LIPCP11150 499 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 DRD3P35462 400 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 GCLMP48507 274 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 CRISP1P54107 249 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 GABRA6Q16445 453 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 HAGHQ16775 308 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 XKR6Q5GH73 641 aa6.27□□□□□ -1.4
NECAP1-220ENST00000639841 TYW3Q6IPR3 259 aaKnown RBP6.27□□□□□ -1.4
NECAP1-220ENST00000639841 SPOPLQ6IQ16 392 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms