RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CENPBD1B2RD01 187 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 NPIPB4C9JG80 1138 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 IMPA2O14732 288 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 MGRN1O60291 552 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 STAMBPO95630 424 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 CLPTM1O96005 669 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 SCG5P05408 212 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 ZNF32P17041 273 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 IFNA8P32881 189 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 SLC9A3P48764 834 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 SGCAQ16586 387 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 SLC36A2Q495M3 483 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 PABPC1L2AQ5JQF8 200 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 TMEM53Q6P2H8 277 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 PODNL1Q6PEZ8 512 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 MBOAT2Q6ZWT7 520 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 AKR7LQ8NHP1 331 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 SLC7A13Q8TCU3 470 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 GTF3AQ92664 365 aaKnown RBP15.22■□□□□ 0.03
PNKP-230ENST00000638016 C7orf34Q96L11 122 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 MDFIQ99750 246 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 DENND2DQ9H6A0 471 aaPredicted RBP15.22■□□□□ 0.03
PNKP-230ENST00000638016 SLC7A8Q9UHI5 535 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 DUSP13Q9UII6 198 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 LOC390937A0A1W2PQ73 354 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 VSTM5A8MXK1 200 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 M0R233 179 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 NAT2P11245 290 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 IL2RGP31785 369 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 MRPS34P82930 218 aaKnown RBP15.21■□□□□ 0.03
PNKP-230ENST00000638016 SEC23BQ15437 767 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 TRIP10Q15642 601 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 IQCCQ4KMZ1 466 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 FGD3Q5JSP0 725 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 HDDC2Q7Z4H3 204 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 ARIH2OSQ8N7S6 290 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 ICA1LQ8NDH6 482 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 Q96M85 177 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 CDH20Q9HBT6 801 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 DCAF13Q9NV06 445 aaKnown RBP15.21■□□□□ 0.03
PNKP-230ENST00000638016 REV1Q9UBZ9 1251 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 IL20RAQ9UHF4 553 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 SPEF1Q9Y4P9 236 aa15.21■□□□□ 0.03
PNKP-230ENST00000638016 A0A1W2PPL8 197 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 A0A1W2PPW3 197 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 SYNGR3O43761 229 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 NCR1O76036 304 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 HPXP02790 462 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 H1F0P07305 194 aaKnown RBP15.2■□□□□ 0.02
PNKP-230ENST00000638016 CCNOP22674 350 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 LAP3P28838 519 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 LIMS1P48059 325 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 HSF2Q03933 536 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 GLO1Q04760 184 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 DBPQ10586 325 aaPredicted RBP15.2■□□□□ 0.02
PNKP-230ENST00000638016 NRN1LQ496H8 165 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 MESTQ5EB52 335 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 TMEM255AQ5JRV8 349 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 ELFN2Q5R3F8 820 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 THSD4Q6ZMP0 1018 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 IL17RELQ6ZVW7 336 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 RNF113BQ8IZP6 322 aaKnown RBP15.2■□□□□ 0.02
PNKP-230ENST00000638016 OR52J3Q8NH60 311 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 NEU4Q8WWR8 484 aaPredicted RBP15.2■□□□□ 0.02
PNKP-230ENST00000638016 RASD2Q96D21 266 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 GPA33Q99795 319 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 ALG12Q9BV10 488 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 SIAEQ9HAT2 523 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 SMURF2Q9HAU4 748 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 RPS6KA6Q9UK32 745 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 FBXL3Q9UKT7 428 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 ATRQ13535 2644 aa15.2■□□□□ 0.02
PNKP-230ENST00000638016 LOC100509620A0A075B734 347 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 NDUFS8O00217 210 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 NDUFAB1O14561 156 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 SEMG1P04279 462 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 LCKP06239 509 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 APEHP13798 732 aaKnown RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 RPL4P36578 427 aaKnown RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 WNT5AP41221 380 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 OMPP47874 163 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 FXYD6P3P58550 94 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 PSG4Q00888 419 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 TBC1D28Q2M2D7 210 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 ZBED5Q49AG3 693 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 RGS7BPQ6MZT1 257 aaPredicted RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 UGT2A3Q6UWM9 527 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 TMPRSS11FQ6ZWK6 438 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 PIGWQ7Z7B1 504 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 CYP4Z1Q86W10 505 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 HIPK1Q86Z02 1210 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 ZNF101Q8IZC7 436 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 UBASH3BQ8TF42 649 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 MSI2Q96DH6 328 aaKnown RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 CHODLQ9H9P2 273 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 MYOZ1Q9NP98 299 aaPredicted RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 EMC7Q9NPA0 242 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 CCNB1IP1Q9NPC3 277 aa15.19■□□□□ 0.02
PNKP-230ENST00000638016 STX18Q9P2W9 335 aaKnown RBP15.19■□□□□ 0.02
PNKP-230ENST00000638016 TEX13CA0A0J9YWL9 993 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms