RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 THRBP10828 461 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 CDAP32320 146 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 APLNRP35414 380 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 CRYBB2P43320 205 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 HSF2Q03933 536 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 LAPTM4AQ15012 233 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 MOGQ16653 247 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 PABPC1L2AQ5JQF8 200 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
CLN6-220ENST00000637450 ZNF583Q96ND8 569 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 LRRC37BQ96QE4 947 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 KCNN2Q9H2S1 579 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 OCEL1Q9H607 264 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 SMURF2Q9HAU4 748 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 STX18Q9P2W9 335 aaKnown RBP15.75■□□□□ 0.11
CLN6-220ENST00000637450 UGT2A1Q9Y4X1 527 aa15.75■□□□□ 0.11
CLN6-220ENST00000637450 A0A0A6YYJ9 748 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 IGKV1D-43A0A0B4J1Z2 117 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 SLC2A10O95528 541 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 NPPAP01160 153 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 IFNA14P01570 189 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 IGHV3-13P01766 116 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 OR1E2P47887 323 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 COQ5Q5HYK3 327 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 ERICH5Q6P6B1 374 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 HDXQ7Z353 690 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 ICA1LQ8NDH6 482 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 OR1J1Q8NGS3 322 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 C10orf82Q8WW14 230 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 HDAC2Q92769 488 aaKnown RBP15.74■□□□□ 0.11
CLN6-220ENST00000637450 NABP1Q96AH0 204 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 TMEM120AQ9BXJ8 343 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 TXNIPQ9H3M7 391 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 MED31Q9Y3C7 131 aa15.74■□□□□ 0.11
CLN6-220ENST00000637450 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 IGHV1-69-2A0A0G2JMI3 117 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 VENTXO95231 258 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 ANPEPP15144 967 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 ZNF32P17041 273 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 CCNOP22674 350 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 STOMP27105 288 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 TEKQ02763 1124 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 FAHD2BQ6P2I3 314 aaPredicted RBP15.73■□□□□ 0.11
CLN6-220ENST00000637450 MEX3DQ86XN8 651 aaKnown RBP15.73■□□□□ 0.11
CLN6-220ENST00000637450 GTF3AQ92664 365 aaKnown RBP15.73■□□□□ 0.11
CLN6-220ENST00000637450 FAHD2AQ96GK7 314 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 POM121L2Q96KW2 1035 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 ZNF665Q9H7R5 613 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 VIPAS39Q9H9C1 493 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 CCNB1IP1Q9NPC3 277 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 DECR2Q9NUI1 292 aa15.73■□□□□ 0.11
CLN6-220ENST00000637450 LOC100509620A0A075B734 347 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 MT-ND5P03915 603 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 DRD4P21917 467 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 WNT5AP41221 380 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 MVKQ03426 396 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 FMODQ06828 376 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 TAF11Q15544 211 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 SGCAQ16586 387 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 AVPI1Q5T686 147 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 FAM27BQ5VT28 67 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 ACSM5Q6NUN0 579 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 SLC25A47Q6Q0C1 308 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 ZNF101Q8IZC7 436 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.72■□□□□ 0.11
CLN6-220ENST00000637450 ZFAND2BQ8WV99 257 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 NSMAFQ92636 917 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 MARS2Q96GW9 593 aaKnown RBP15.72■□□□□ 0.11
CLN6-220ENST00000637450 G6PC2Q9NQR9 355 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 MRGBPQ9NV56 204 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 HIF3AQ9Y2N7 669 aa15.72■□□□□ 0.11
CLN6-220ENST00000637450 C5orf49A4QMS7 147 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 HTR3EA5X5Y0 456 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 BBIP1A8MTZ0 92 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 MRASO14807 208 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 PIP5K1CO60331 668 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 DEAF1O75398 565 aaPredicted RBP15.71■□□□□ 0.11
CLN6-220ENST00000637450 PNPP00491 289 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 NR2C1P13056 603 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 KDELR2P33947 212 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 PSG4Q00888 419 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 GLO1Q04760 184 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 KLF10Q13118 480 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 SCGB2A2Q13296 93 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 TSTQ16762 297 aaKnown RBP15.71■□□□□ 0.11
CLN6-220ENST00000637450 ZNF718Q3SXZ3 478 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 CYBRD1Q53TN4 286 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 ALG10Q5BKT4 473 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 THEM4Q5T1C6 240 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 SHQ1Q6PI26 577 aaKnown RBP15.71■□□□□ 0.11
CLN6-220ENST00000637450 C1orf229Q6ZS94 237 aaPredicted RBP15.71■□□□□ 0.11
CLN6-220ENST00000637450 USP51Q70EK9 711 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 SEMA6DQ8NFY4 1073 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 AKR7LQ8NHP1 331 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 RBP7Q96R05 134 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 ALG12Q9BV10 488 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 SAP30LQ9HAJ7 183 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 EIF3KQ9UBQ5 218 aaKnown RBP15.71■□□□□ 0.11
CLN6-220ENST00000637450 A4GNTQ9UNA3 340 aa15.71■□□□□ 0.11
CLN6-220ENST00000637450 WIPI2Q9Y4P8 454 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms