RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 KRTAP21-3Q3LHN1 58 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 ZBED5Q49AG3 693 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 THEM4Q5T1C6 240 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 SLC25A47Q6Q0C1 308 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 TMPRSS11FQ6ZWK6 438 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 LRRC75AQ8NAA5 344 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
PNKP-228ENST00000637325 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
PNKP-228ENST00000637325 MCUR1Q96AQ8 359 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 PYURFQ96I23 114 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
PNKP-228ENST00000637325 NSMCE2Q96MF7 247 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 TSPAN32Q96QS1 320 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 PIMREGQ9BSJ6 248 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 NDUFAF4Q9P032 175 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 GRHPRQ9UBQ7 328 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 AURKCQ9UQB9 309 aa11.91□□□□□ -0.5
PNKP-228ENST00000637325 LOC390937A0A1W2PQ73 354 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 A0A1W2PRQ8 180 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 NDUFS8O00217 210 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 XKRYO14609 159 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 CD5LO43866 347 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 DIRAS1O95057 198 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 ADRA2AP08913 450 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 CCL2P13500 99 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 HSD17B1P14061 328 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 APLNRP35414 380 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 MSX2P35548 267 aaPredicted RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 EVX1P49640 407 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 MNAT1P51948 309 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 SMIM11AP58511 58 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 SELENOVP59797 346 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 LOXL1Q08397 574 aaPredicted RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 DGCR6Q14129 220 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 DEFB107AQ8IZN7 70 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 OR52J3Q8NH60 311 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 SLC7A13Q8TCU3 470 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 CCT8L2Q96SF2 557 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 OR51B6Q9H340 312 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 REV1Q9UBZ9 1251 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 DUSP13Q9UII6 198 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 FZR1Q9UM11 496 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.5
PNKP-228ENST00000637325 ANK3Q12955 4377 aaKnown RBP11.9□□□□□ -0.5
PNKP-228ENST00000637325 IGKV1D-43A0A0B4J1Z2 117 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 A0A1W2PPL8 197 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 A0A1W2PPW3 197 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 CDC42EP2O14613 210 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 SYNGR3O43761 229 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 TLX2O43763 284 aaPredicted RBP11.89□□□□□ -0.51
PNKP-228ENST00000637325 LCKP06239 509 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 CD14P08571 375 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 FAM157BP0CG42 384 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 DAOP14920 347 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 USF1P22415 310 aaPredicted RBP11.89□□□□□ -0.51
PNKP-228ENST00000637325 CCNOP22674 350 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 VLDLRP98155 873 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 SPIBQ01892 262 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 GGTLC2Q14390 218 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 FXNQ16595 210 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 TMEM249Q2WGJ8 235 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 IQCCQ4KMZ1 466 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 PABPC1L2AQ5JQF8 200 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 TSEN54Q7Z6J9 526 aaKnown RBP11.89□□□□□ -0.51
PNKP-228ENST00000637325 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
PNKP-228ENST00000637325 FAM86B1Q8N7N1 296 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 CLDN22Q8N7P3 220 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 ARIH2OSQ8N7S6 290 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 ZNF519Q8TB69 540 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 NMD3Q96D46 503 aaKnown RBP11.89□□□□□ -0.51
PNKP-228ENST00000637325 C7orf34Q96L11 122 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 ZNF570Q96NI8 536 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 CD300AQ9UGN4 299 aa11.89□□□□□ -0.51
PNKP-228ENST00000637325 H7C1C5 153 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 M0R233 179 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 DYNC1I1O14576 645 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 ARPC2O15144 300 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 NDUFB2O95178 105 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 GADD45GO95257 159 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 MMP7P09237 267 aaPredicted RBP11.88□□□□□ -0.51
PNKP-228ENST00000637325 ZNF32P17041 273 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
PNKP-228ENST00000637325 RAD52P43351 418 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 PCBD1P61457 104 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 LCN6P62502 163 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 FHL1Q13642 323 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 FAM27BQ5VT28 67 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 LRP11Q86VZ4 500 aa11.88□□□□□ -0.51
PNKP-228ENST00000637325 PAQR4Q8N4S7 273 aaPredicted RBP11.88□□□□□ -0.51
PNKP-228ENST00000637325 ICA1LQ8NDH6 482 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms