RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MELKQ14680 651 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 GINS1Q14691 196 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 OCLNQ16625 522 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 LRRC36Q1X8D7 754 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 C3orf36Q3SXR2 165 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 VWA1Q6PCB0 445 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 CLEC18BQ6UXF7 455 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 RHOUQ7L0Q8 258 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 FJX1Q86VR8 437 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 EGFL6Q8IUX8 553 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 C8orf59Q8N0T1 100 aaPredicted RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 GABRG1Q8N1C3 465 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 RPRMLQ8N4K4 120 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 FAM26EQ8N5C1 309 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 FAM169BQ8N8A8 192 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 RELL2Q8NC24 303 aaPredicted RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 CLEC18CQ8NCF0 446 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 NAXEQ8NCW5 288 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 NPEPL1Q8NDH3 523 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 STEAP2Q8NFT2 490 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 OR4Q3Q8NH05 313 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 TMEM163Q8TC26 289 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 CA5BP1Q8WTZ4 195 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 IPCEF1Q8WWN9 437 aaPredicted RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 HDAC2Q92769 488 aaKnown RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 Q96M85 177 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 Q96MT0 163 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 MBOAT4Q96T53 435 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 MNTQ99583 582 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 FOXB1Q99853 325 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 ANKRD60Q9BZ19 345 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 NMNAT2Q9BZQ4 307 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 ENKD1Q9H0I2 346 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 NELFAQ9H3P2 528 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 C1orf198Q9H425 327 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 RIBC2Q9H4K1 309 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 FAM118AQ9NWS6 357 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 HAO2Q9NYQ3 351 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 GMPPBQ9Y5P6 360 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 DIDO1Q9BTC0 2240 aaKnown RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 SPENQ96T58 3664 aaKnown RBP5.92□□□□□ -1.46
UPF3B-205ENST00000636792 NBASA2RRP1 2371 aa5.92□□□□□ -1.46
UPF3B-205ENST00000636792 ARPC4-TTLL3A0A0A6YYG9 625 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 EEF1E1-BLOC1S5C9J1V9 151 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ARHGEF9O43307 516 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 EEF1E1O43324 174 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 MITFO75030 526 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 KHDRBS3O75525 346 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SERPINI2O75830 405 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SNAP29O95721 258 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 KLK2P20151 261 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 MSR1P21757 451 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 POU1F1P28069 291 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 HOXC12P31275 282 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CD79BP40259 229 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CXCR4P61073 352 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 PCBD1P61457 104 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SIRPAP78324 504 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ROR2Q01974 943 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 FOXF2Q12947 444 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 FOXD4Q12950 439 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CAMK2DQ13557 499 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CRMP1Q14194 572 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 GGTLC2Q14390 218 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SNAPC1Q16533 368 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 KCNMB1Q16558 191 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CLEC12AQ5QGZ9 265 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ZNF362Q5T0B9 420 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 TSPO2Q5TGU0 170 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ZNF691Q5VV52 312 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 FBXW10Q5XX13 1052 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 LEG1Q6P5S2 330 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ANKRD16Q6P6B7 361 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SLC25A47Q6Q0C1 308 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 IZUMO2Q6UXV1 221 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 C3P1Q6ZMU1 363 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 PTCHD4Q6ZW05 846 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 USP51Q70EK9 711 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 CXXC5Q7LFL8 322 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 NUFIP2Q7Z417 695 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 IGFN1Q86VF2 1251 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 UBE2J2Q8N2K1 259 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 KDM8Q8N371 416 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SLC37A3Q8NCC5 494 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SDR9C7Q8NEX9 313 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 OR52E2Q8NGJ4 325 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 FAM81AQ8TBF8 368 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 HAVCR2Q8TDQ0 301 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 FBLIM1Q8WUP2 373 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 NRG4Q8WWG1 115 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 TFAP2CQ92754 450 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 RNASE6Q93091 150 aaKnown RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 MCHR2Q969V1 340 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 RASD2Q96D21 266 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 DNAJA3Q96EY1 480 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 ALKBH3Q96Q83 286 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-205ENST00000636792 DDOQ99489 341 aa5.91□□□□□ -1.46
UPF3B-205ENST00000636792 SYT4Q9H2B2 425 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms