RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 DZANK1Q9NVP4 752 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 SHOXO15266 292 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 IL12BP29460 328 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 LBX1P52954 281 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 FUT7Q11130 342 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 HLXQ14774 488 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 MFSD13AQ14CX5 517 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 RTN4RL2Q86UN3 420 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 LRRC75AQ8NAA5 344 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM131CQ96AQ9 280 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 KLHDC7BQ96G42 594 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 SPACA5Q96QH8 159 aa12.67□□□□□ -0.38
CACNA1A-228ENST00000636610 TMEM272A0A1B0GTI8 110 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 B8ZZF3 427 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 PRAMEF26H0Y7S4 382 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 CLPSP04118 112 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 ACHEP22303 614 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 NUDT1P36639 197 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 MNDAP41218 407 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 EFNA3P52797 238 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC37A1P57057 533 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 SEC61A1P61619 476 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 YPEL5P62699 121 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 NSDHLQ15738 373 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 MOGAT2Q3SYC2 334 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC22A6Q4U2R8 563 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC6A19Q695T7 634 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 STPG2Q8N412 459 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 ARHGEF39Q8N4T4 335 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 TTC9Q92623 222 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 TBL1XR1Q9BZK7 514 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 DIABLOQ9NR28 239 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 GMEB2Q9UKD1 530 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 TMEM235A6NFC5 223 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 PNMTP11086 282 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 PRSS3P35030 304 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 RAG2P55895 527 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 IDO2Q6ZQW0 420 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 TMUB2Q71RG4 321 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 C4orf45Q96LM5 186 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 NUDT22Q9BRQ3 303 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 POFUT1Q9H488 388 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 COA3Q9Y2R0 106 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 NPTNQ9Y639 398 aa12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 PHF3Q92576 2039 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-228ENST00000636610 XRCC3O43542 346 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 PRAF2O60831 178 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 AMY2AP04746 511 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 HOXC4P09017 264 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 MANEAQ5SRI9 462 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 H7C417 338 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 CALCBP10092 127 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 CAPZA2P47755 286 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 DMWDQ09019 674 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 HLA-DQA1Q5Y7H0 255 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 LANCL3Q6ZV70 420 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 SDR16C5Q8N3Y7 309 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
CACNA1A-228ENST00000636610 F5H5P2 479 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 NSA2O95478 260 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 S100A11P31949 105 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 RAB11BQ15907 218 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM185BQ9H7F4 350 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 MRPL22Q9NWU5 206 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 DHDHQ9UQ10 334 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 NMBP08949 121 aa12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 GIPP09681 153 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-228ENST00000636610 PTGS2P35354 604 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms