RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ACHEP22303 614 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 SEC24CP53992 1094 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 MRPS34P82930 218 aaKnown RBP15.39■□□□□ 0.05
PNKP-225ENST00000636214 RIN1Q13671 783 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 CCNIQ14094 377 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 TRAM2Q15035 370 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 SGCAQ16586 387 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 ALKBH6Q3KRA9 238 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 FAM205BPQ63HN1 556 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 IL17RELQ6ZVW7 336 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 FKBP9P1Q75LS8 142 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 RRM2BQ7LG56 351 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 ZNF519Q8TB69 540 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 ALG12Q9BV10 488 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 TAAR3PQ9P1P4 343 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 MYEF2Q9P2K5 600 aaKnown RBP15.39■□□□□ 0.05
PNKP-225ENST00000636214 EIF3KQ9UBQ5 218 aaKnown RBP15.39■□□□□ 0.05
PNKP-225ENST00000636214 HIF3AQ9Y2N7 669 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 TPD52L2O43399 206 aaKnown RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 LILRA1O75019 489 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 SNAP29O95721 258 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 NAT2P11245 290 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 COX4I1P13073 169 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 SRP14P37108 136 aaKnown RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 YAP1P46937 504 aaKnown RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 RPL27P61353 136 aaKnown RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 LIPEQ05469 1076 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 LAPTM4AQ15012 233 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 CR1LQ2VPA4 569 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 IFI44LQ53G44 452 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 ARMC4Q5T2S8 1044 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 ZNF730Q6ZMV8 503 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 CYP4Z1Q86W10 505 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 NRMQ8IXM6 262 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 OFCC1Q8IZS5 231 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 SEPHS2Q99611 448 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 HOPXQ9BPY8 73 aaPredicted RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 ZNF416Q9BWM5 594 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 CCDC134Q9H6E4 229 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 MED4Q9NPJ6 270 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 HINT3Q9NQE9 182 aaKnown RBP15.38■□□□□ 0.05
PNKP-225ENST00000636214 CMTM6Q9NX76 183 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 A4GNTQ9UNA3 340 aa15.38■□□□□ 0.05
PNKP-225ENST00000636214 A6NIZ1 184 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 EFCAB9A8MZ26 197 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 CXCR6O00574 342 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 HPXP02790 462 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 IGFBP1P08833 259 aaPredicted RBP15.37■□□□□ 0.05
PNKP-225ENST00000636214 CDAP32320 146 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 SLC7A2P52569 658 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 UCP2P55851 309 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 CTXN1P60606 82 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 RAP1BP61224 184 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 RAP1AP62834 184 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 FMODQ06828 376 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 TRIP10Q15642 601 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 PCGF3Q3KNV8 242 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 ANKDD1AQ495B1 522 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 PABPC1L2AQ5JQF8 200 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 THEM4Q5T1C6 240 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 OAFQ86UD1 273 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 ALDH16A1Q8IZ83 802 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 PAQR4Q8N4S7 273 aaPredicted RBP15.37■□□□□ 0.05
PNKP-225ENST00000636214 HDAC2Q92769 488 aaKnown RBP15.37■□□□□ 0.05
PNKP-225ENST00000636214 FAM162AQ96A26 154 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 NARFLQ9H6Q4 476 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 RHCGQ9UBD6 479 aa15.37■□□□□ 0.05
PNKP-225ENST00000636214 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 TSPAN19P0C672 248 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 STOMP27105 288 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 GCH1P30793 250 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 IL2RGP31785 369 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 THBS2P35442 1172 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 RPL4P36578 427 aaKnown RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 SLC9A3P48764 834 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 GDI2P50395 445 aaKnown RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 ZNF133P52736 654 aaPredicted RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 CDH15P55291 814 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 TMEM33P57088 247 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 PCBD1P61457 104 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 MRPS11P82912 194 aaKnown RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 TEKQ02763 1124 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 ELFN2Q5R3F8 820 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 GLCCI1Q86VQ1 547 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 PHC2Q8IXK0 858 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 SLC15A3Q8IY34 581 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 RNF113BQ8IZP6 322 aaKnown RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 OR1J1Q8NGS3 322 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 OR51A7Q8NH64 312 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 HSH2DQ96JZ2 352 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 KCTD14Q9BQ13 255 aaPredicted RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 SOX7Q9BT81 388 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 ZNF275Q9NSD4 429 aaPredicted RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 DECR2Q9NUI1 292 aa15.36■□□□□ 0.05
PNKP-225ENST00000636214 TMEFF2Q9UIK5 374 aaPredicted RBP15.36■□□□□ 0.05
PNKP-225ENST00000636214 TRAV27A0A087WT01 109 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 A0A1W2PPL8 197 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 C5orf49A4QMS7 147 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms