RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 LEG1Q6P5S2 330 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 MDP1Q86V88 176 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 ZDHHC13Q8IUH4 622 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 SVOPLQ8N434 492 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 OR4Q3Q8NH05 313 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 OR4K13Q8NH42 304 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 HTRA1Q92743 480 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 SLC38A2Q96QD8 506 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 NMNAT3Q96T66 252 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 GABARAPL1Q9H0R8 117 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 SEMA6AQ9H2E6 1030 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 SIAEQ9HAT2 523 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 CSMD1Q96PZ7 3565 aa17.69■□□□□ 0.42
PTCD3-220ENST00000627371 IGHV1-18A0A0C4DH31 117 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 DSCAMO60469 2012 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 RENP00797 406 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 CD79AP11912 226 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 OSMP13725 252 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 DAPP51397 102 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTCD3-220ENST00000627371 ETFDHQ16134 617 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 SLC35F1Q5T1Q4 408 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 ADAM5Q6NVV9 412 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 DPPA2Q7Z7J5 298 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 SDR9C7Q8NEX9 313 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 OR52E2Q8NGJ4 325 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 PKP2Q99959 881 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 SH3GL3Q99963 347 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 NOX3Q9HBY0 568 aa17.68■□□□□ 0.42
PTCD3-220ENST00000627371 A0A1W2PPL8 197 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SLC16A7O60669 478 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 KHDRBS3O75525 346 aaKnown RBP17.67■□□□□ 0.42
PTCD3-220ENST00000627371 CRABP1P29762 137 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 GUCA1AP43080 201 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-220ENST00000627371 PIGFQ07326 219 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SPOCK1Q08629 439 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 PGGHGQ32M88 737 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SLC36A2Q495M3 483 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 DNM1P34Q6PK57 102 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SLC16A14Q7RTX9 510 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 PARP8Q8N3A8 854 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 NPEPL1Q8NDH3 523 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 KBTBD8Q8NFY9 601 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 FGFBP3Q8TAT2 258 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 RADILQ96JH8 1075 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 NUAK2Q9H093 628 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SEC61A2Q9H9S3 476 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 S100A14Q9HCY8 104 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 PAPOLBQ9NRJ5 636 aaKnown RBP17.67■□□□□ 0.42
PTCD3-220ENST00000627371 OAZ3Q9UMX2 235 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 PDZD2O15018 2839 aa17.67■□□□□ 0.42
PTCD3-220ENST00000627371 SHISA9B4DS77 424 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 CECR9P0C854 216 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 GIPRP48546 466 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 PTDSS1P48651 473 aaKnown RBP17.66■□□□□ 0.42
PTCD3-220ENST00000627371 IDH3GP51553 393 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-220ENST00000627371 RAB1AP62820 205 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 NPRL3Q12980 569 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 SGCAQ16586 387 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 ZNF362Q5T0B9 420 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-220ENST00000627371 FAM27BQ5VT28 67 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-220ENST00000627371 LRRC18Q8N456 261 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 ICA1LQ8NDH6 482 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 NRGNQ92686 78 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 ZNF75AQ96N20 296 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 TSSK2Q96PF2 358 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 RACGAP1Q9H0H5 632 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 POLE4Q9NR33 117 aa17.66■□□□□ 0.42
PTCD3-220ENST00000627371 OR6C68A6NDL8 312 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 DCTN6O00399 190 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 RAB36O95755 333 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 CELA3BP08861 270 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 PATE4P0C8F1 98 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 ZNF14P17017 642 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 MSR1P21757 451 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 POU1F1P28069 291 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 LAP3P28838 519 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 GRK5P34947 590 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 ZNF672Q499Z4 452 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 SLC27A4Q6P1M0 643 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 PAMR1Q6UXH9 720 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 MYPOPQ86VE0 399 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 GLB1L2Q8IW92 636 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 OR6V1Q8N148 313 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 IQCF1Q8N6M8 205 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 LILRB1Q8NHL6 650 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 AKAP1Q92667 903 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 DDOQ99489 341 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 KCNN2Q9H2S1 579 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 RERGLQ9H628 205 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 UBTD1Q9HAC8 227 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 RPRD1BQ9NQG5 326 aaKnown RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 KRT84Q9NSB2 600 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 KLHL21Q9UJP4 597 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 FBXL3Q9UKT7 428 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 COA3Q9Y2R0 106 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-220ENST00000627371 FKBP7Q9Y680 259 aa17.65■□□□□ 0.42
PTCD3-220ENST00000627371 IGLV1-36A0A0B4J1U3 117 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms