RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 OR52N5Q8NH56 324 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 CHAC2Q8WUX2 184 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 ITPKCQ96DU7 683 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 FOXN4Q96NZ1 517 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 MRI1Q9BV20 369 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 MRPL13Q9BYD1 178 aaKnown RBP19.73■□□□□ 0.75
PNKP-220ENST00000627232 TMEM185BQ9H7F4 350 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 SPATA2Q9UM82 520 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 PCDHGA1Q9Y5H4 931 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 TRBV5-7A0A0A0MS05 114 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 AQP7P3A6NL99 342 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 GPR171O14626 319 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 ZNF17P17021 662 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 TCEA1P23193 301 aaKnown RBP19.72■□□□□ 0.75
PNKP-220ENST00000627232 KIR3DL2P43630 455 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 RIDAP52758 137 aaKnown RBP19.72■□□□□ 0.75
PNKP-220ENST00000627232 FMODQ06828 376 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 C19orf57Q0VDD7 668 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 Q0VFX4 171 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 THEM4Q5T1C6 240 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 TMEM164Q5U3C3 297 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 TIGD3Q6B0B8 471 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 TMPPEQ6ZT21 453 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 SYT9Q86SS6 491 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 WDFY1Q8IWB7 410 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 GPR148Q8TDV2 347 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 EDEM2Q9BV94 578 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 FAM117AQ9C073 453 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 RABL2AQ9UBK7 228 aaPredicted RBP19.72■□□□□ 0.75
PNKP-220ENST00000627232 RABL2BQ9UNT1 228 aa19.72■□□□□ 0.75
PNKP-220ENST00000627232 GALR2O43603 387 aaPredicted RBP19.71■□□□□ 0.75
PNKP-220ENST00000627232 SSX4O60224 188 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 CBR3O75828 277 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 PAHP00439 452 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 SERPINA7P05543 415 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 PITPNBP48739 271 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 WDR38Q5JTN6 314 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 GLB1L2Q8IW92 636 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 GPR87Q9BY21 358 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 C11orf54Q9H0W9 315 aaPredicted RBP19.71■□□□□ 0.75
PNKP-220ENST00000627232 TCF7L1Q9HCS4 588 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 DKKL1Q9UK85 242 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 V9GY05 133 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 A0A1B0GTH9 108 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 BOLA2-SMG1P6H3BVE0 249 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 AIPO00170 330 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 SULT2B1O00204 365 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 PLA2G10O15496 165 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 TRAF3IP2O43734 574 aaPredicted RBP19.71■□□□□ 0.75
PNKP-220ENST00000627232 SFTPDP35247 375 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 NR4A2P43354 598 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 CD97P48960 835 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 GPR85P60893 370 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 TMEM225Q6GV28 225 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 PYHIN1Q6K0P9 492 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 DEGS2Q6QHC5 323 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 BAIAP2L2Q6UXY1 529 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 STAC2Q6ZMT1 411 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.71■□□□□ 0.75
PNKP-220ENST00000627232 NOXO1Q8NFA2 376 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 IL17RDQ8NFM7 739 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 OR5H6Q8NGV6 325 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 OR6X1Q8NH79 312 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 ADAMTS14Q8WXS8 1223 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 SLC25A44Q96H78 314 aaPredicted RBP19.71■□□□□ 0.75
PNKP-220ENST00000627232 GFI1Q99684 422 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 BRD7Q9NPI1 651 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 P4HTMQ9NXG6 502 aa19.71■□□□□ 0.75
PNKP-220ENST00000627232 COL6A3P12111 3177 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 ALPK2Q86TB3 2170 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 FREM3P0C091 2139 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 A0A087WV48 116 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 A0A0G2JMP0 313 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 A0A0X1KG70 313 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 IFITM5A6NNB3 132 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 C21orf140B9A014 251 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 ZIC3O60481 467 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 MPZL1O95297 269 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 IGHG1P01857 330 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 OPN1LWP04000 364 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 P04436 131 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 SNRPBP14678 240 aaKnown RBP19.7■□□□□ 0.74
PNKP-220ENST00000627232 CLDN6P56747 220 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 MADCAM1Q13477 382 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 ZNF468Q5VIY5 522 aaPredicted RBP19.7■□□□□ 0.74
PNKP-220ENST00000627232 CELF2-AS1Q8N7Q2 184 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 OR4M2Q8NGB6 313 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 EMC6Q9BV81 110 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 SLC25A18Q9H1K4 315 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 LRP12Q9Y561 859 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 SDK2Q58EX2 2172 aa19.7■□□□□ 0.74
PNKP-220ENST00000627232 IGKV1D-43A0A0B4J1Z2 117 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 A0A1W2PNU3 283 aaPredicted RBP19.69■□□□□ 0.74
PNKP-220ENST00000627232 MASP2O00187 686 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 PGA4P0DJD7 388 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 PGA3P0DJD8 388 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 CLRN1P58418 232 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 HACD4Q5VWC8 232 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 OTPQ5XKR4 325 aa19.69■□□□□ 0.74
PNKP-220ENST00000627232 MZT2BQ6NZ67 158 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms