RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 STSP08842 583 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 MRPL3P09001 348 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 EDNRAP25101 427 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 GLO1Q04760 184 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 RAB40BQ12829 278 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 SLC25A47Q6Q0C1 308 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 LYPD4Q6UWN0 246 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 FAM214BQ7L5A3 538 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 ERI1Q8IV48 349 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 CNEP1R1Q8N9A8 125 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF511Q8NB15 262 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 OR4F15Q8NGB8 312 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 CCDC90BQ9GZT6 254 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 MRPS18AQ9NVS2 196 aaKnown RBP15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 HAO2Q9NYQ3 351 aa15.75■□□□□ 0.11
PTCHD3-202ENST00000622555 TVP23AA6NH52 213 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 RGS10O43665 173 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 IGHV3-9P01782 118 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 PCMT1P22061 227 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 PCSK6P29122 969 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 POU4F2Q12837 409 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 GGTLC2Q14390 218 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 GUSBP1Q15486 140 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 TSPO2Q5TGU0 170 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 CLVS1Q8IUQ0 354 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 OR52I1Q8NGK6 324 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 ISOC1Q96CN7 298 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 ALKBH3Q96Q83 286 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 CNN2Q99439 309 aaKnown RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 ADGRL4Q9HBW9 690 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 IGSF10Q6WRI0 2623 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 A0A1W2PPL8 197 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 OR6C65A6NJZ3 312 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 FADS2O95864 444 aaKnown RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 IL2RAP01589 272 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 CDK1P06493 297 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 NAA10P41227 235 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 BLVRAP53004 296 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 C10orf128Q5T292 105 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 GLB1L2Q8IW92 636 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 POMGNT2Q8NAT1 580 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 TMEM80Q96HE8 168 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 TTYH2Q9BSA4 534 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 RBM24Q9BX46 236 aaKnown RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 LINC00470Q9BZP3 86 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 CRLF2Q9HC73 371 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 SLC7A10Q9NS82 523 aa15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 EXOGQ9Y2C4 368 aaKnown RBP15.74■□□□□ 0.11
PTCHD3-202ENST00000622555 DHHO43323 396 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 SELENOFO60613 162 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 TOXO94900 526 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 RAB36O95755 333 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 SBK2P0C263 348 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 TMIGD3P0DMS9 266 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 GLI4P10075 376 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 C21orf33P30042 268 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 TIMP3P35625 211 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF133P52736 654 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 MVKQ03426 396 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 FOXF2Q12947 444 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 NEDD8Q15843 81 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 UBE2J2Q8N2K1 259 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 MUL1Q969V5 352 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 SIGLEC11Q96RL6 698 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 SEC61A2Q9H9S3 476 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 FGF20Q9NP95 211 aaPredicted RBP15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 UPB1Q9UBR1 384 aa15.73■□□□□ 0.11
PTCHD3-202ENST00000622555 MT-ND2P03891 347 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 LAP3P28838 519 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 KIR2DL2P43627 348 aaPredicted RBP15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 OR3A2P47893 321 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF84P51523 738 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 CASP6P55212 293 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 EIF2S3LQ2VIR3 472 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 RIPPLY2Q5TAB7 128 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 OTPQ5XKR4 325 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 LINGO2Q7L985 606 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 PRSS48Q7RTY5 328 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 OR6K3Q8NGY3 331 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 C12orf43Q96C57 262 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 ZFP3Q96NJ6 502 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 INTS14Q96SY0 518 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 GPR35Q9HC97 309 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 DIMT1Q9UNQ2 313 aaKnown RBP15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 SNX5Q9Y5X3 404 aa15.72■□□□□ 0.11
PTCHD3-202ENST00000622555 MPZL1O95297 269 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 TFP02787 698 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 CRHP06850 196 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 ADRA2AP08913 450 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 GAAP10253 952 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 CDAP32320 146 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 HSF2Q03933 536 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 MEP1BQ16820 701 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 VWA1Q6PCB0 445 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 TIGD4Q8IY51 512 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 SLC26A10Q8NG04 563 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 OR10H4Q8NGA5 316 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 SMAP2Q8WU79 429 aaPredicted RBP15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 ZNF837Q96EG3 531 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms