RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ARMC4Q5T2S8 1044 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 RGS7BPQ6MZT1 257 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 SLC16A14Q7RTX9 510 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 IGFN1Q86VF2 1251 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-210ENST00000621245 ICA1LQ8NDH6 482 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 GATAD2BQ8WXI9 593 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 LRRC58Q96CX6 371 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 RABEP2Q9H5N1 569 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 EVA1AQ9H8M9 152 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 RIMS3Q9UJD0 308 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 SPEF1Q9Y4P9 236 aa9.76□□□□□ -0.85
CPNE3-210ENST00000621245 IGLV3-9A0A075B6K5 115 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 LOC100509620A0A075B734 347 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 VSTM5A8MXK1 200 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 PPIHO43447 177 aaKnown RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 BCL10O95999 233 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 IGHG1P01857 330 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 MT-ND1P03886 318 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 GAAP10253 952 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF250P15622 560 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ACADSP16219 412 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF32P17041 273 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ACHEP22303 614 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SRP14P37108 136 aaKnown RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF133P52736 654 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 DVL1P1P54792 670 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 TAS2R41P59536 307 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 RPS23P62266 143 aaKnown RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 CCL8P80075 99 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 KLF10Q13118 480 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 TOP3AQ13472 1001 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 LAPTM4AQ15012 233 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 NKPD1Q17RQ9 610 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 PABPC1L2AQ5JQF8 200 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 RFPL4BQ6ZWI9 263 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF771Q7L3S4 317 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SLC30A8Q8IWU4 369 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 MICU2Q8IYU8 434 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF101Q8IZC7 436 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 RBM15BQ8NDT2 890 aaKnown RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 AKR7LQ8NHP1 331 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SLC26A7Q8TE54 656 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 TMEM239Q8WW34 195 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 NSMAFQ92636 917 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 RDH5Q92781 318 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SGTBQ96EQ0 304 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 MPP4Q96JB8 637 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 ZNF583Q96ND8 569 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SLC19A3Q9BZV2 496 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 DENND2DQ9H6A0 471 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 RNF121Q9H920 327 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 CDH20Q9HBT6 801 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 HIF1ANQ9NWT6 349 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 FBXO9Q9UK97 447 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-210ENST00000621245 A4GNTQ9UNA3 340 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 SNX13Q9Y5W8 968 aa9.75□□□□□ -0.85
CPNE3-210ENST00000621245 C17orf100A8MU93 164 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MCIDASD6RGH6 385 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 J3KTA2 159 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MRASO14807 208 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 OR5F1O95221 314 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SNAP29O95721 258 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 HIST1H2ABP04908 130 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SCG5P05408 212 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 LCKP06239 509 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SNRPBP14678 240 aaKnown RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 H2AFXP16104 143 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MAKP20794 623 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 KLF3P57682 345 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 ERVK-25P63136 954 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MVKQ03426 396 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 FHL1Q13642 323 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 TSTQ16762 297 aaKnown RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 LRRC23Q53EV4 343 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 CYBRD1Q53TN4 286 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 INTS11Q5TA45 600 aaKnown RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 OTPQ5XKR4 325 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 TMEM53Q6P2H8 277 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 HIST3H2AQ7L7L0 130 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SNX32Q86XE0 403 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SEMA6DQ8NFY4 1073 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SYNPRQ8TBG9 265 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 C10orf82Q8WW14 230 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 IPCEF1Q8WWN9 437 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 HIST1H2ACQ93077 130 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 TMEM186Q96B77 213 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 LRRC37BQ96QE4 947 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MS4A5Q9H3V2 200 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 POFUT1Q9H488 388 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 METTL17Q9H7H0 456 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 HINT3Q9NQE9 182 aaKnown RBP9.74□□□□□ -0.85
CPNE3-210ENST00000621245 SAR1AQ9NR31 198 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 INIPQ9NRY2 104 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 MAN2C1Q9NTJ4 1040 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 DCAF16Q9NXF7 216 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 RHCGQ9UBD6 479 aa9.74□□□□□ -0.85
CPNE3-210ENST00000621245 LOC105371242A0A075B767 164 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms